3cbf: Difference between revisions

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<StructureSection load='3cbf' size='340' side='right'caption='[[3cbf]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
<StructureSection load='3cbf' size='340' side='right'caption='[[3cbf]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3cbf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"flavobacterium_thermophilum"_yoshida_and_oshima_1971 "flavobacterium thermophilum" yoshida and oshima 1971]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CBF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CBF FirstGlance]. <br>
<table><tr><td colspan='2'>[[3cbf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CBF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CBF FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=N5F:(2S)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]HEXANEDIOIC+ACID'>N5F</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.67&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2dtv|2dtv]], [[2egy|2egy]], [[2z1y|2z1y]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=N5F:(2S)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]HEXANEDIOIC+ACID'>N5F</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lysN ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 "Flavobacterium thermophilum" Yoshida and Oshima 1971])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/2-aminoadipate_transaminase 2-aminoadipate transaminase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.39 2.6.1.39] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cbf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cbf OCA], [https://pdbe.org/3cbf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cbf RCSB], [https://www.ebi.ac.uk/pdbsum/3cbf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cbf ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cbf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cbf OCA], [https://pdbe.org/3cbf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cbf RCSB], [https://www.ebi.ac.uk/pdbsum/3cbf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cbf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/LYSN_THET2 LYSN_THET2]] Catalyzes the transfer of an amino group between 2-oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also contributes in the biosynthesis of other amino acids such as leucine.<ref>PMID:15256574</ref>
[https://www.uniprot.org/uniprot/LYSN_THET2 LYSN_THET2] Catalyzes the transfer of an amino group between 2-oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also contributes in the biosynthesis of other amino acids such as leucine.<ref>PMID:15256574</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Flavobacterium thermophilum yoshida and oshima 1971]]
[[Category: 2-aminoadipate transaminase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Fushinobu, S]]
[[Category: Kuzuyama, T]]
[[Category: Miyagawa, T]]
[[Category: Miyazaki, T]]
[[Category: Nishiyama, M]]
[[Category: Tomita, T]]
[[Category: Alpha-aminoadipate aminotransferase]]
[[Category: Substrate specifity]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Transferase]]
[[Category: Fushinobu S]]
[[Category: Kuzuyama T]]
[[Category: Miyagawa T]]
[[Category: Miyazaki T]]
[[Category: Nishiyama M]]
[[Category: Tomita T]]

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