2zg9: Difference between revisions

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-{{Seed}}
-[[Image:2zg9.png|left|200px]]
-<!--
+==Crystal Structure of Pd(allyl)/apo-H114AFr==
-The line below this paragraph, containing "STRUCTURE_2zg9", creates the "Structure Box" on the page.
+<StructureSection load='2zg9' size='340' side='right'caption='[[2zg9]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2zg9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZG9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZG9 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PLL:PALLADIUM(II)+ALLYL+COMPLEX'>PLL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_2zg9|  PDB=2zg9  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zg9 OCA], [https://pdbe.org/2zg9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zg9 RCSB], [https://www.ebi.ac.uk/pdbsum/2zg9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zg9 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/FRIL_HORSE FRIL_HORSE] Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zg/2zg9_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zg9 ConSurf].
+<div style="clear:both"></div>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+We report the preparation of organometallic Pd(allyl) dinuclear complexes in protein cages of apo-Fr by reactions with [Pd(allyl)Cl]2 (allyl = eta3-C3H5). One of the dinuclear complexes is converted to a trinuclear complex by replacing a Pd-coordinated His residue to an Ala residue. These results suggest that multinuclear metal complexes with various coordination structures could be prepared by the deletion or introduction of His, Cys, and Glu at appropriate positions on protein surface.
-===Crystal Structure of Pd(allyl)/apo-H114AFr===
+Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage.,Abe S, Niemeyer J, Abe M, Takezawa Y, Ueno T, Hikage T, Erker G, Watanabe Y J Am Chem Soc. 2008 Aug 13;130(32):10512-4. Epub 2008 Jul 18. PMID:18636721<ref>PMID:18636721</ref>
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+</div>
+<div class="pdbe-citations 2zg9" style="background-color:#fffaf0;"></div>
-<!--
+==See Also==
-The line below this paragraph, {{ABSTRACT_PUBMED_18636721}}, adds the Publication Abstract to the page
+*[[Ferritin 3D structures|Ferritin 3D structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 18636721 is the PubMed ID number.
+== References ==
--->
+<references/>
-{{ABSTRACT_PUBMED_18636721}}
+__TOC__
+</StructureSection>
-==About this Structure==
-ZG9 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZG9 OCA].
-==Reference==
-<ref group="xtra">PMID:18636721</ref><references group="xtra"/>
 [[Category: Equus caballus]]
-[[Category: Abe, M.]]
+[[Category: Large Structures]]
-[[Category: Abe, S.]]
+[[Category: Abe M]]
-[[Category: Erker, G.]]
+[[Category: Abe S]]
-[[Category: Hikage, T.]]
+[[Category: Erker G]]
-[[Category: Niemeyer, J.]]
+[[Category: Hikage T]]
-[[Category: Ueno, T.]]
+[[Category: Niemeyer J]]
-[[Category: Watanabe, Y.]]
+[[Category: Ueno T]]
-[[Category: Artificial metalloprotein]]
+[[Category: Watanabe Y]]
-[[Category: Iron storage protein]]
-[[Category: Light chain apoferritin]]
-[[Category: Metal binding protein]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 16:27:54 2009''