2yv2: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2yv2.png|left|200px]]


<!--
==Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1==
The line below this paragraph, containing "STRUCTURE_2yv2", creates the "Structure Box" on the page.
<StructureSection load='2yv2' size='340' side='right'caption='[[2yv2]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2yv2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YV2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YV2 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yv2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yv2 OCA], [https://pdbe.org/2yv2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yv2 RCSB], [https://www.ebi.ac.uk/pdbsum/2yv2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yv2 ProSAT], [https://www.topsan.org/Proteins/RSGI/2yv2 TOPSAN]</span></td></tr>
{{STRUCTURE_2yv2|  PDB=2yv2 |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9YD40_AERPE Q9YD40_AERPE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/2yv2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yv2 ConSurf].
<div style="clear:both"></div>


===Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1===
==See Also==
 
*[[Succinyl-CoA synthetase 3D structures|Succinyl-CoA synthetase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2YV2 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YV2 OCA].
[[Category: Aeropyrum pernix K1]]
[[Category: Aeropyrum pernix]]
[[Category: Large Structures]]
[[Category: Kuramitsu, S.]]
[[Category: Kuramitsu S]]
[[Category: Niwa, H.]]
[[Category: Niwa H]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Coa-binding domain]]
[[Category: Ligase]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 17:05:21 2008''

Latest revision as of 12:05, 25 October 2023

Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1

Structural highlights

2yv2 is a 1 chain structure with sequence from Aeropyrum pernix K1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9YD40_AERPE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2yv2, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2yv2&oldid=3925963"