2yv2: Difference between revisions

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[[Image:2yv2.gif|left|200px]]<br /><applet load="2yv2" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2yv2, resolution 2.20&Aring;" />
'''Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1'''<br />


==About this Structure==
==Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1==
2YV2 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Active as [http://en.wikipedia.org/wiki/Succinate--CoA_ligase_(ADP-forming) Succinate--CoA ligase (ADP-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.2.1.5 6.2.1.5] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YV2 OCA].
<StructureSection load='2yv2' size='340' side='right'caption='[[2yv2]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
[[Category: Aeropyrum pernix]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2yv2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YV2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YV2 FirstGlance]. <br>
[[Category: Succinate--CoA ligase (ADP-forming)]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
[[Category: Kuramitsu, S.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yv2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yv2 OCA], [https://pdbe.org/2yv2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yv2 RCSB], [https://www.ebi.ac.uk/pdbsum/2yv2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yv2 ProSAT], [https://www.topsan.org/Proteins/RSGI/2yv2 TOPSAN]</span></td></tr>
[[Category: Niwa, H.]]
</table>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
== Function ==
[[Category: Yokoyama, S.]]
[https://www.uniprot.org/uniprot/Q9YD40_AERPE Q9YD40_AERPE]  
[[Category: coa-binding domain]]
== Evolutionary Conservation ==
[[Category: ligase]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: national project on protein structural and functional analyses]]
Check<jmol>
[[Category: nppsfa]]
  <jmolCheckbox>
[[Category: riken structural genomics/proteomics initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/2yv2_consurf.spt"</scriptWhenChecked>
[[Category: rsgi]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yv2 ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:58:02 2008''
==See Also==
*[[Succinyl-CoA synthetase 3D structures|Succinyl-CoA synthetase 3D structures]]
__TOC__
</StructureSection>
[[Category: Aeropyrum pernix K1]]
[[Category: Large Structures]]
[[Category: Kuramitsu S]]
[[Category: Niwa H]]
[[Category: Yokoyama S]]

Latest revision as of 12:05, 25 October 2023

Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1

Structural highlights

2yv2 is a 1 chain structure with sequence from Aeropyrum pernix K1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9YD40_AERPE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2yv2, resolution 2.20Å

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