2p9y: Difference between revisions

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[[Image:2p9y.png|left|200px]]


{{STRUCTURE_2p9y|  PDB=2p9y  |  SCENE=  }}
==Crystal structure of TTHB049 from Thermus thermophilus HB8==
 
<StructureSection load='2p9y' size='340' side='right'caption='[[2p9y]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
===Crystal structure of TTHB049 from Thermus thermophilus HB8===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2p9y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9Y FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
[[2p9y]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9Y OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9y OCA], [https://pdbe.org/2p9y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9y RCSB], [https://www.ebi.ac.uk/pdbsum/2p9y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9y ProSAT], [https://www.topsan.org/Proteins/RSGI/2p9y TOPSAN]</span></td></tr>
[[Category: Alpha-ribazole phosphatase]]
</table>
[[Category: Thermus thermophilus hb8]]
== Function ==
[[Category: Kageyama, Y.]]
[https://www.uniprot.org/uniprot/Q53WB3_THET8 Q53WB3_THET8]  
[[Category: Kunishima, N.]]
== Evolutionary Conservation ==
[[Category: Matsuura, Y.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
Check<jmol>
[[Category: Shimada, H.]]
  <jmolCheckbox>
[[Category: Sugahara, M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9y_consurf.spt"</scriptWhenChecked>
[[Category: Hydrolase]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: National project on protein structural and functional analyse]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Nppsfa]]
  </jmolCheckbox>
[[Category: Riken structural genomics/proteomics initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p9y ConSurf].
[[Category: Rsgi]]
<div style="clear:both"></div>
[[Category: Structural genomic]]
__TOC__
[[Category: Thermus thermophilus hb8]]
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Kageyama Y]]
[[Category: Kunishima N]]
[[Category: Matsuura Y]]
[[Category: Shimada H]]
[[Category: Sugahara M]]

Latest revision as of 11:59, 25 October 2023

Crystal structure of TTHB049 from Thermus thermophilus HB8Crystal structure of TTHB049 from Thermus thermophilus HB8

Structural highlights

2p9y is a 2 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.85Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q53WB3_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2p9y, resolution 1.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA