2p6m: Difference between revisions

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-[[Image:2p6m.jpg|left|200px]]
- {{Structure
+==Crystal structure of TTHB049 from Thermus thermophilus HB8==
-|PDB= 2p6m |SIZE=350|CAPTION= <scene name='initialview01'>2p6m</scene>, resolution 1.90&Aring;
+<StructureSection load='2p6m' size='340' side='right'caption='[[2p6m]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
+<table><tr><td colspan='2'>[[2p6m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P6M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P6M FirstGlance]. <br>
-|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-ribazole_phosphatase Alpha-ribazole phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.73 3.1.3.73] </span>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-|GENE=
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-|DOMAIN=
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p6m OCA], [https://pdbe.org/2p6m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p6m RCSB], [https://www.ebi.ac.uk/pdbsum/2p6m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p6m ProSAT], [https://www.topsan.org/Proteins/RSGI/2p6m TOPSAN]</span></td></tr>
-|RELATEDENTRY=[[2p6o|2P6O]], [[2p75|2P75]], [[2p77|2P77]], [[2p78|2P78]], [[2p79|2P79]]
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p6m OCA], [http://www.ebi.ac.uk/pdbsum/2p6m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2p6m RCSB]</span>
+== Function ==
-}}
+[https://www.uniprot.org/uniprot/Q53WB3_THET8 Q53WB3_THET8]
+== Evolutionary Conservation ==
-'''Crystal structure of TTHB049 from Thermus thermophilus HB8'''
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
-==About this Structure==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p6/2p6m_consurf.spt"</scriptWhenChecked>
-P6M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P6M OCA].
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Alpha-ribazole phosphatase]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Single protein]]
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p6m ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermus thermophilus]]
-[[Category: Kunishima, N.]]
+[[Category: Kunishima N]]
-[[Category: Matsuura, Y.]]
+[[Category: Matsuura Y]]
-[[Category: Morikawa, Y.]]
+[[Category: Morikawa Y]]
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+[[Category: Shimada H]]
-[[Category: Shimada, H.]]
+[[Category: Sugahara M]]
-[[Category: Sugahara, M.]]
-[[Category: hydrolase]]
-[[Category: national project on protein structural and functional analyse]]
-[[Category: nppsfa]]
-[[Category: riken structural genomics/proteomics initiative]]
-[[Category: rsgi]]
-[[Category: structural genomic]]
-[[Category: thermus thermophilus hb8]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:30:50 2008''