2o9q: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2o9q.jpg|left|200px]]<br /><applet load="2o9q" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2o9q, resolution 1.700&Aring;" />
-'''The crystal structure of Bovine Trypsin complexed with a small inhibition peptide ORB2K'''<br />
-==About this Structure==
+==The crystal structure of Bovine Trypsin complexed with a small inhibition peptide ORB2K==
-O9Q is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O9Q OCA].
+<StructureSection load='2o9q' size='340' side='right'caption='[[2o9q]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2o9q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O9Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O9Q FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o9q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o9q OCA], [https://pdbe.org/2o9q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o9q RCSB], [https://www.ebi.ac.uk/pdbsum/2o9q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o9q ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o9/2o9q_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o9q ConSurf].
+<div style="clear:both"></div>
+==See Also==
+*[[Trypsin 3D structures|Trypsin 3D structures]]
+__TOC__
+</StructureSection>
 [[Category: Bos taurus]]
-[[Category: Protein complex]]
+[[Category: Large Structures]]
-[[Category: Trypsin]]
+[[Category: Gong W]]
-[[Category: Gong, W.]]
+[[Category: Lai R]]
-[[Category: Lai, R.]]
+[[Category: Li J]]
-[[Category: Li, J.]]
+[[Category: Wang J]]
-[[Category: Wang, J.]]
+[[Category: Xu X]]
-[[Category: Xu, X.]]
+[[Category: Zhang C]]
-[[Category: Zhang, C.]]
-[[Category: CA]]
-[[Category: SO4]]
-[[Category: hydrolase]]
-[[Category: inhibitor]]
-[[Category: peptide]]
-[[Category: trypsin]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:26:12 2008''