2ggs: Difference between revisions

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{{Seed}}
[[Image:2ggs.png|left|200px]]


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==crystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaii==
The line below this paragraph, containing "STRUCTURE_2ggs", creates the "Structure Box" on the page.
<StructureSection load='2ggs' size='340' side='right'caption='[[2ggs]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ggs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii Sulfurisphaera tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GGS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
{{STRUCTURE_2ggs|  PDB=2ggs  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ggs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ggs OCA], [https://pdbe.org/2ggs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ggs RCSB], [https://www.ebi.ac.uk/pdbsum/2ggs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ggs ProSAT]</span></td></tr>
 
</table>
===crystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaii===
== Function ==
 
[https://www.uniprot.org/uniprot/Q96Z61_SULTO Q96Z61_SULTO]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2GGS is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii Sulfolobus tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGS OCA].  
Check<jmol>
[[Category: Sulfolobus tokodaii]]
  <jmolCheckbox>
[[Category: DTDP-4-dehydrorhamnose reductase]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/2ggs_consurf.spt"</scriptWhenChecked>
[[Category: Kuramitsu, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Masui, R.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Mizushima, T.]]
  </jmolCheckbox>
[[Category: Rajakannan, V.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ggs ConSurf].
[[Category: Suzuki, A.]]
<div style="clear:both"></div>
[[Category: Yamane, T.]]
__TOC__
[[Category: Alpha]]
</StructureSection>
[[Category: Beta]]
[[Category: Large Structures]]
 
[[Category: Sulfurisphaera tokodaii]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 10:58:16 2009''
[[Category: Kuramitsu S]]
[[Category: Masui R]]
[[Category: Mizushima T]]
[[Category: Rajakannan V]]
[[Category: Suzuki A]]
[[Category: Yamane T]]

Latest revision as of 11:49, 25 October 2023

crystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaiicrystal structure of hypothetical dTDP-4-dehydrorhamnose reductase from sulfolobus tokodaii

Structural highlights

2ggs is a 2 chain structure with sequence from Sulfurisphaera tokodaii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q96Z61_SULTO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2ggs, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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