2epj: Difference between revisions

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-[[Image:2epj.jpg|left|200px]]
- {{Structure
+==Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix==
-|PDB= 2epj |SIZE=350|CAPTION= <scene name='initialview01'>2epj</scene>, resolution 1.70&Aring;
+<StructureSection load='2epj' size='340' side='right'caption='[[2epj]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=PMP:4&#39;-DEOXY-4&#39;-AMINOPYRIDOXAL-5&#39;-PHOSPHATE'>PMP</scene>
+<table><tr><td colspan='2'>[[2epj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EPJ FirstGlance]. <br>
-|ACTIVITY= [http://en.wikipedia.org/wiki/Glutamate-1-semialdehyde_2,1-aminomutase Glutamate-1-semialdehyde 2,1-aminomutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.3.8 5.4.3.8]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-|GENE= hemL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=56636 Aeropyrum pernix])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2epj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2epj OCA], [https://pdbe.org/2epj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2epj RCSB], [https://www.ebi.ac.uk/pdbsum/2epj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2epj ProSAT], [https://www.topsan.org/Proteins/RSGI/2epj TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/GSA_AERPE GSA_AERPE]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ep/2epj_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2epj ConSurf].
+<div style="clear:both"></div>
-'''Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix'''
+==See Also==
+*[[Aminomutase 3D structures|Aminomutase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-EPJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPJ OCA].
+[[Category: Aeropyrum pernix K1]]
-[[Category: Aeropyrum pernix]]
+[[Category: Large Structures]]
-[[Category: Glutamate-1-semialdehyde 2,1-aminomutase]]
+[[Category: Kunishima N]]
-[[Category: Single protein]]
+[[Category: Mizutani H]]
-[[Category: Kunishima, N.]]
-[[Category: Mizutani, H.]]
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
-[[Category: PMP]]
-[[Category: gsa]]
-[[Category: isomerase]]
-[[Category: national project on protein structural and functional analyse]]
-[[Category: nppsfa]]
-[[Category: plp enzyme]]
-[[Category: riken structural genomics/proteomics initiative]]
-[[Category: rsgi]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 15:02:16 2008''