2epj: Difference between revisions

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[[Image:2epj.jpg|left|200px]]


{{Structure
==Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix==
|PDB= 2epj |SIZE=350|CAPTION= <scene name='initialview01'>2epj</scene>, resolution 1.70&Aring;
<StructureSection load='2epj' size='340' side='right'caption='[[2epj]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=PMP:4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE'>PMP</scene>
<table><tr><td colspan='2'>[[2epj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EPJ FirstGlance]. <br>
|ACTIVITY= [http://en.wikipedia.org/wiki/Glutamate-1-semialdehyde_2,1-aminomutase Glutamate-1-semialdehyde 2,1-aminomutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.3.8 5.4.3.8]  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
|GENE= hemL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=56636 Aeropyrum pernix])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2epj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2epj OCA], [https://pdbe.org/2epj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2epj RCSB], [https://www.ebi.ac.uk/pdbsum/2epj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2epj ProSAT], [https://www.topsan.org/Proteins/RSGI/2epj TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GSA_AERPE GSA_AERPE]  
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ep/2epj_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2epj ConSurf].
<div style="clear:both"></div>


'''Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix'''
==See Also==
 
*[[Aminomutase 3D structures|Aminomutase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2EPJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPJ OCA].
[[Category: Aeropyrum pernix K1]]
[[Category: Aeropyrum pernix]]
[[Category: Large Structures]]
[[Category: Glutamate-1-semialdehyde 2,1-aminomutase]]
[[Category: Kunishima N]]
[[Category: Single protein]]
[[Category: Mizutani H]]
[[Category: Kunishima, N.]]
[[Category: Mizutani, H.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: PMP]]
[[Category: gsa]]
[[Category: isomerase]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: plp enzyme]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:43:00 2008''

Latest revision as of 11:43, 25 October 2023

Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernixCrystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix

Structural highlights

2epj is a 1 chain structure with sequence from Aeropyrum pernix K1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

GSA_AERPE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2epj, resolution 1.70Å

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