2ekn: Difference between revisions

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{{Seed}}
[[Image:2ekn.png|left|200px]]


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==Structure of PH1811 protein from Pyrococcus horikoshii==
The line below this paragraph, containing "STRUCTURE_2ekn", creates the "Structure Box" on the page.
<StructureSection load='2ekn' size='340' side='right'caption='[[2ekn]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ekn]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EKN FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
{{STRUCTURE_2ekn|  PDB=2ekn  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ekn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ekn OCA], [https://pdbe.org/2ekn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ekn RCSB], [https://www.ebi.ac.uk/pdbsum/2ekn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ekn ProSAT], [https://www.topsan.org/Proteins/RSGI/2ekn TOPSAN]</span></td></tr>
 
</table>
===Structure of PH1811 protein from Pyrococcus horikoshii===
== Function ==
 
[https://www.uniprot.org/uniprot/MOAC_PYRHO MOAC_PYRHO] Together with MoaA, is involved in the conversion of 5'-GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) (By similarity).
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2EKN is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKN OCA].  
Check<jmol>
[[Category: Pyrococcus horikoshii]]
  <jmolCheckbox>
[[Category: Lokanath, N K.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/2ekn_consurf.spt"</scriptWhenChecked>
[[Category: Pampa, K J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Biosynthetic protein]]
  </jmolCheckbox>
[[Category: Molybdenum cofactor biosynthesis protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ekn ConSurf].
[[Category: National project on protein structural and functional analyse]]
<div style="clear:both"></div>
[[Category: Nppsfa]]
__TOC__
[[Category: Riken structural genomics/proteomics initiative]]
</StructureSection>
[[Category: Rsgi]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Pyrococcus horikoshii OT3]]
 
[[Category: Lokanath NK]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:01:27 2008''
[[Category: Pampa KJ]]

Latest revision as of 11:42, 25 October 2023

Structure of PH1811 protein from Pyrococcus horikoshiiStructure of PH1811 protein from Pyrococcus horikoshii

Structural highlights

2ekn is a 3 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

MOAC_PYRHO Together with MoaA, is involved in the conversion of 5'-GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2ekn, resolution 2.05Å

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