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[[Image:2ei0.jpg|left|200px]]


{{Structure
==Anaerobic Crystal Structure Analysis of 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. strain C18 complexed with 3,4-dihydroxybiphenyl==
|PDB= 2ei0 |SIZE=350|CAPTION= <scene name='initialview01'>2ei0</scene>, resolution 1.60&Aring;
<StructureSection load='2ei0' size='340' side='right'caption='[[2ei0]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Fe2+Binding+Site+For+Residue+A+399'>AC1</scene>, <scene name='pdbsite=AC2:Mg+Binding+Site+For+Residue+A+398'>AC2</scene>, <scene name='pdbsite=AC3:Bp7+Binding+Site+For+Residue+A+400'>AC3</scene>, <scene name='pdbsite=AC4:Bp7+Binding+Site+For+Residue+A+401'>AC4</scene>, <scene name='pdbsite=AC5:Bp7+Binding+Site+For+Residue+A+402'>AC5</scene> and <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+A+901'>AC6</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=BP7:1,1&#39;-BIPHENYL-3,4-DIOL'>BP7</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
<table><tr><td colspan='2'>[[2ei0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._C18 Pseudomonas sp. C18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EI0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EI0 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
|GENE= doxg ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=306 Pseudomonas sp.])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BP7:1,1-BIPHENYL-3,4-DIOL'>BP7</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ei0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ei0 OCA], [https://pdbe.org/2ei0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ei0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ei0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ei0 ProSAT]</span></td></tr>
|RELATEDENTRY=[[2ehz|2ehz]], [[2ei1|2ei1]], [[2ei2|2ei2]], [[2ei3|2ei3]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ei0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ei0 OCA], [http://www.ebi.ac.uk/pdbsum/2ei0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ei0 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/NAHC_PSEU8 NAHC_PSEU8] Involved in the naphthalene catabolic pathway. Catalyzes the meta-cleavage of 1,2-dihydroxynaphthalene (1,2-DHN) to yield 2-hydroxychromene-2-carboxylic acid (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ei/2ei0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ei0 ConSurf].
<div style="clear:both"></div>


'''Anaerobic Crystal Structure Analysis of 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. strain C18 complexed with 3,4-dihydroxybiphenyl'''
==See Also==
 
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2EI0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_sp. Pseudomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EI0 OCA].
[[Category: Large Structures]]
[[Category: Pseudomonas sp.]]
[[Category: Pseudomonas sp. C18]]
[[Category: Single protein]]
[[Category: Bolin JT]]
[[Category: Bolin, J T.]]
[[Category: Colbert CL]]
[[Category: Colbert, C L.]]
[[Category: Kelker MS]]
[[Category: Kelker, M S.]]
[[Category: Neau DB]]
[[Category: Neau, D B.]]
[[Category: extradiol dioxygenase]]
[[Category: oxidoreductase]]
[[Category: protein substrate complex]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:49:28 2008''

Latest revision as of 11:40, 25 October 2023

Anaerobic Crystal Structure Analysis of 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. strain C18 complexed with 3,4-dihydroxybiphenylAnaerobic Crystal Structure Analysis of 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. strain C18 complexed with 3,4-dihydroxybiphenyl

Structural highlights

2ei0 is a 1 chain structure with sequence from Pseudomonas sp. C18. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NAHC_PSEU8 Involved in the naphthalene catabolic pathway. Catalyzes the meta-cleavage of 1,2-dihydroxynaphthalene (1,2-DHN) to yield 2-hydroxychromene-2-carboxylic acid (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ei0, resolution 1.60Å

Drag the structure with the mouse to rotate

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