2eez: Difference between revisions

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{{Seed}}
[[Image:2eez.png|left|200px]]


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==Crystal structure of alanine dehydrogenase from themus thermophilus==
The line below this paragraph, containing "STRUCTURE_2eez", creates the "Structure Box" on the page.
<StructureSection load='2eez' size='340' side='right'caption='[[2eez]], [[Resolution|resolution]] 2.71&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.71&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [https://pdbe.org/2eez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [https://www.ebi.ac.uk/pdbsum/2eez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eez ProSAT], [https://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>
{{STRUCTURE_2eez|  PDB=2eez  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of alanine dehydrogenase from themus thermophilus===
[https://www.uniprot.org/uniprot/Q5SLS7_THET8 Q5SLS7_THET8]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2EEZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA].  
  <jmolCheckbox>
[[Category: Alanine dehydrogenase]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/2eez_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Thermus thermophilus]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Karthe, P.]]
  </jmolCheckbox>
[[Category: Kumarevel, T S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eez ConSurf].
[[Category: Kuramitsu, S.]]
<div style="clear:both"></div>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
__TOC__
[[Category: Yokoyama, S.]]
</StructureSection>
[[Category: Alanine dehydrogenase]]
[[Category: Large Structures]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Thermus thermophilus HB8]]
[[Category: Nppsfa]]
[[Category: Karthe P]]
[[Category: Oxidoreductase]]
[[Category: Kumarevel TS]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Kuramitsu S]]
[[Category: Rsgi]]
[[Category: Yokoyama S]]
[[Category: Structural genomic]]
[[Category: Thermus]]
[[Category: Ttha0216]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 15:51:58 2008''

Latest revision as of 11:39, 25 October 2023

Crystal structure of alanine dehydrogenase from themus thermophilusCrystal structure of alanine dehydrogenase from themus thermophilus

Structural highlights

2eez is a 6 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.71Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SLS7_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2eez, resolution 2.71Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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