2eba: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2eba.jpg|left|200px]]


{{Structure
==Crystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilus==
|PDB= 2eba |SIZE=350|CAPTION= <scene name='initialview01'>2eba</scene>, resolution 2.21&Aring;
<StructureSection load='2eba' size='340' side='right'caption='[[2eba]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE DINUCLEOTIDE'>FAD</scene>
<table><tr><td colspan='2'>[[2eba]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EBA FirstGlance]. <br>
|ACTIVITY= [http://en.wikipedia.org/wiki/Glutaryl-CoA_dehydrogenase Glutaryl-CoA dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.99.7 1.3.99.7]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.21&#8491;</td></tr>
|GENE= TTHA0789 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eba FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eba OCA], [https://pdbe.org/2eba PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eba RCSB], [https://www.ebi.ac.uk/pdbsum/2eba PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eba ProSAT], [https://www.topsan.org/Proteins/RSGI/2eba TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilus'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q5SK63_THET8 Q5SK63_THET8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2EBA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBA OCA].  
Check<jmol>
[[Category: Glutaryl-CoA dehydrogenase]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eb/2eba_consurf.spt"</scriptWhenChecked>
[[Category: Thermus thermophilus]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Karthe, P.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Kumarevel, T S.]]
  </jmolCheckbox>
[[Category: Kuramitsu, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eba ConSurf].
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<div style="clear:both"></div>
[[Category: Yokoyama, S.]]
__TOC__
[[Category: FAD]]
</StructureSection>
[[Category: fad]]
[[Category: Large Structures]]
[[Category: glutaryl-coa dehydrogenase]]
[[Category: Thermus thermophilus HB8]]
[[Category: national project on protein structural and functional analyse]]
[[Category: Karthe P]]
[[Category: nppsfa]]
[[Category: Kumarevel TS]]
[[Category: oxidoreductase]]
[[Category: Kuramitsu S]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Yokoyama S]]
[[Category: rsgi]]
[[Category: structural genomic]]
[[Category: thermus thermophilius]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:37:54 2008''

Latest revision as of 11:38, 25 October 2023

Crystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilusCrystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilus

Structural highlights

2eba is a 8 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.21Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SK63_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2eba, resolution 2.21Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2eba&oldid=3924558"