2eaa: Difference between revisions

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OCA

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 ==Crystal Structure of Adzuki Bean 7S Globulin-3==
-<StructureSection load='2eaa' size='340' side='right' caption='[[2eaa]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
+<StructureSection load='2eaa' size='340' side='right'caption='[[2eaa]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2eaa]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Azuki_bean Azuki bean]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EAA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EAA FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2eaa]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Vigna_angularis Vigna angularis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EAA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EAA FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ea7|2ea7]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">7S-3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3914 Azuki bean])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eaa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eaa OCA], [https://pdbe.org/2eaa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eaa RCSB], [https://www.ebi.ac.uk/pdbsum/2eaa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eaa ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eaa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eaa OCA], [http://pdbe.org/2eaa PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2eaa RCSB], [http://www.ebi.ac.uk/pdbsum/2eaa PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A4PIA0_PHAAN A4PIA0_PHAAN]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ea/2eaa_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ea/2eaa_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eaa ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 31: / Line 33: @@
 __TOC__
 </StructureSection>
-[[Category: Azuki bean]]
+[[Category: Large Structures]]
-[[Category: Fukuda, T]]
+[[Category: Vigna angularis]]
-[[Category: Mikami, B]]
+[[Category: Fukuda T]]
-[[Category: Utsumi, S]]
+[[Category: Mikami B]]
-[[Category: Beta barrel]]
+[[Category: Utsumi S]]
-[[Category: Cupin superfamily]]
-[[Category: Plant protein]]