2ea9: Difference between revisions

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[[Image:2ea9.gif|left|200px]]


<!--
==Crystal structure of a hypothetical protein JW2626 from E.coli==
The line below this paragraph, containing "STRUCTURE_2ea9", creates the "Structure Box" on the page.
<StructureSection load='2ea9' size='340' side='right'caption='[[2ea9]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ea9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EA9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EA9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ea9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ea9 OCA], [https://pdbe.org/2ea9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ea9 RCSB], [https://www.ebi.ac.uk/pdbsum/2ea9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ea9 ProSAT], [https://www.topsan.org/Proteins/RSGI/2ea9 TOPSAN]</span></td></tr>
{{STRUCTURE_2ea9|  PDB=2ea9  |  SCENE= }}
</table>
 
== Function ==
'''Crystal structure of a hypothetical protein JW2626 from E.coli'''
[https://www.uniprot.org/uniprot/YFJZ_ECOLI YFJZ_ECOLI] Might be an antitoxin component of a toxin-antitoxin (TA) module. A putative antitoxin that may inactivate probable toxin YpjF (Potential).
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2EA9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EA9 OCA].  
  <jmolCheckbox>
[[Category: Escherichia coli]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ea/2ea9_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Kuramitsu, S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Okazaki, N.]]
  </jmolCheckbox>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ea9 ConSurf].
[[Category: Yamamoto, M.]]
<div style="clear:both"></div>
[[Category: Yokoyama, S.]]
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Hypothetical protein]]
[[Category: Large Structures]]
[[Category: Jw2626]]
[[Category: Kuramitsu S]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Okazaki N]]
[[Category: Nppsfa]]
[[Category: Yamamoto M]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Yokoyama S]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 02:13:59 2008''

Latest revision as of 11:37, 25 October 2023

Crystal structure of a hypothetical protein JW2626 from E.coliCrystal structure of a hypothetical protein JW2626 from E.coli

Structural highlights

2ea9 is a 1 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YFJZ_ECOLI Might be an antitoxin component of a toxin-antitoxin (TA) module. A putative antitoxin that may inactivate probable toxin YpjF (Potential).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2ea9, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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