2e5y: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Epsilon subunit and ATP complex of F1F0-ATP synthase from the Thermophilic Bacillus PS3==
-<StructureSection load='2e5y' size='340' side='right' caption='[[2e5y]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
+<StructureSection load='2e5y' size='340' side='right'caption='[[2e5y]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2e5y]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacp3 Bacp3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E5Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E5Y FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2e5y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._PS3 Bacillus sp. PS3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E5Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E5Y FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.92&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1aqt|1aqt]], [[1bsn|1bsn]], [[2e5t|2e5t]], [[2e5u|2e5u]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.14 3.6.3.14] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e5y OCA], [https://pdbe.org/2e5y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e5y RCSB], [https://www.ebi.ac.uk/pdbsum/2e5y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e5y ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e5y OCA], [http://pdbe.org/2e5y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2e5y RCSB], [http://www.ebi.ac.uk/pdbsum/2e5y PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/ATPE_BACP3 ATPE_BACP3]] Produces ATP from ADP in the presence of a proton gradient across the membrane.
+[https://www.uniprot.org/uniprot/ATPE_BACP3 ATPE_BACP3] Produces ATP from ADP in the presence of a proton gradient across the membrane.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/2e5y_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/2e5y_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e5y ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 31: / Line 31: @@
 ==See Also==
-*[[ATPase|ATPase]]
+*[[ATPase 3D structures|ATPase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Bacp3]]
+[[Category: Bacillus sp. PS3]]
-[[Category: Akutsu, H]]
+[[Category: Large Structures]]
-[[Category: Yagi, H]]
+[[Category: Akutsu H]]
-[[Category: Atp synthase]]
+[[Category: Yagi H]]
-[[Category: Epsilon subunit]]
-[[Category: F1-atpase]]
-[[Category: F1fo atp synthase]]
-[[Category: Hydrolase]]