2dva: Difference between revisions

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 ==Crystal structure of peanut lectin GAL-BETA-1,3-GALNAC-ALPHA-O-ME (Methyl-T-antigen) complex==
-<StructureSection load='2dva' size='340' side='right' caption='[[2dva]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+<StructureSection load='2dva' size='340' side='right'caption='[[2dva]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2dva]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DVA FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2dva]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DVA FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MGC:ALPHA-METHYL-N-ACETYL-D-GALACTOSAMINE'>MGC</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2pel|2pel]], [[2tep|2tep]], [[1v6i|1v6i]], [[1v6j|1v6j]], [[1v6k|1v6k]], [[2dh1|2dh1]], [[2dv9|2dv9]], [[2dvb|2dvb]], [[2dvd|2dvd]], [[2dvf|2dvf]], [[2dvg|2dvg]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MGC:ALPHA-METHYL-N-ACETYL-D-GALACTOSAMINE'>MGC</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dva OCA], [http://pdbe.org/2dva PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dva RCSB], [http://www.ebi.ac.uk/pdbsum/2dva PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dva ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dva OCA], [https://pdbe.org/2dva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dva RCSB], [https://www.ebi.ac.uk/pdbsum/2dva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dva ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/LECG_ARAHY LECG_ARAHY]] D-galactose specific lectin.
+[https://www.uniprot.org/uniprot/LECG_ARAHY LECG_ARAHY] D-galactose specific lectin.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 31: / Line 31: @@
 ==See Also==
+*[[Agglutinin 3D structures|Agglutinin 3D structures]]
 *[[Galactose-binding lectin|Galactose-binding lectin]]
 == References ==
@@ Line 37: / Line 38: @@
 </StructureSection>
 [[Category: Arachis hypogaea]]
-[[Category: Jayaraman, N]]
+[[Category: Large Structures]]
-[[Category: Mitra, N]]
+[[Category: Jayaraman N]]
-[[Category: Natchiar, S K]]
+[[Category: Mitra N]]
-[[Category: Srinivas, O]]
+[[Category: Natchiar SK]]
-[[Category: Surolia, A]]
+[[Category: Srinivas O]]
-[[Category: Vijayan, M]]
+[[Category: Surolia A]]
-[[Category: Agglutinin]]
+[[Category: Vijayan M]]
-[[Category: Carbohydrate specificity]]
-[[Category: Legume lectin]]
-[[Category: Open quaternary structure]]
-[[Category: Sugar binding protein]]