2dv6: Difference between revisions
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==Crystal structure of nitrite reductase from Hyphomicrobium denitrificans== | ==Crystal structure of nitrite reductase from Hyphomicrobium denitrificans== | ||
<StructureSection load='2dv6' size='340' side='right' caption='[[2dv6]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='2dv6' size='340' side='right'caption='[[2dv6]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2dv6]] is a 6 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2dv6]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Hyphomicrobium_denitrificans Hyphomicrobium denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DV6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DV6 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dv6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dv6 OCA], [https://pdbe.org/2dv6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dv6 RCSB], [https://www.ebi.ac.uk/pdbsum/2dv6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dv6 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q8KKH4_9HYPH Q8KKH4_9HYPH] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dv/2dv6_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dv/2dv6_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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==See Also== | ==See Also== | ||
*[[ | *[[Nitrite reductase 3D structures|Nitrite reductase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Hyphomicrobium denitrificans]] | [[Category: Hyphomicrobium denitrificans]] | ||
[[Category: Inoue | [[Category: Large Structures]] | ||
[[Category: Kai | [[Category: Inoue T]] | ||
[[Category: Nojiri | [[Category: Kai Y]] | ||
[[Category: Suzuki | [[Category: Nojiri M]] | ||
[[Category: Xie | [[Category: Suzuki S]] | ||
[[Category: Yamamoto | [[Category: Xie Y]] | ||
[[Category: Yamamoto T]] | |||