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[[Image:2dpl.jpg|left|200px]]


{{Structure
==Crystal Structure of the GMP synthase from Pyrococcus horikoshii OT3==
|PDB= 2dpl |SIZE=350|CAPTION= <scene name='initialview01'>2dpl</scene>, resolution 1.43&Aring;
<StructureSection load='2dpl' size='340' side='right'caption='[[2dpl]], [[Resolution|resolution]] 1.43&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2dpl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DPL FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/GMP_synthase_(glutamine-hydrolyzing) GMP synthase (glutamine-hydrolyzing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.5.2 6.3.5.2] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.43&#8491;</td></tr>
|GENE= guaAB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 Pyrococcus horikoshii])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dpl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpl OCA], [https://pdbe.org/2dpl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dpl RCSB], [https://www.ebi.ac.uk/pdbsum/2dpl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dpl ProSAT], [https://www.topsan.org/Proteins/RSGI/2dpl TOPSAN]</span></td></tr>
|DOMAIN=
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dpl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpl OCA], [http://www.ebi.ac.uk/pdbsum/2dpl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2dpl RCSB]</span>
[https://www.uniprot.org/uniprot/GUAAB_PYRHO GUAAB_PYRHO] Catalyzes the synthesis of GMP from XMP (By similarity).
}}
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dp/2dpl_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dpl ConSurf].
<div style="clear:both"></div>


'''Crystal Structure of the GMP synthase from Pyrococcus horikoshii OT3'''
==See Also==
 
*[[GMP synthase|GMP synthase]]
 
__TOC__
==About this Structure==
</StructureSection>
2DPL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPL OCA].
[[Category: Large Structures]]
[[Category: GMP synthase (glutamine-hydrolyzing)]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Pyrococcus horikoshii]]
[[Category: Asada Y]]
[[Category: Single protein]]
[[Category: Kunishima N]]
[[Category: Asada, Y.]]
[[Category: Kunishima, N.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: pyrococcus horikoshii ot3]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:37:41 2008''

Latest revision as of 11:28, 25 October 2023

Crystal Structure of the GMP synthase from Pyrococcus horikoshii OT3Crystal Structure of the GMP synthase from Pyrococcus horikoshii OT3

Structural highlights

2dpl is a 2 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.43Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

GUAAB_PYRHO Catalyzes the synthesis of GMP from XMP (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2dpl, resolution 1.43Å

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