2d8e: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2d8e.png|left|200px]]


<!--
==Structure of Chorismate Mutase (Form II) from Thermus Thermophilus HB8==
The line below this paragraph, containing "STRUCTURE_2d8e", creates the "Structure Box" on the page.
<StructureSection load='2d8e' size='340' side='right'caption='[[2d8e]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2d8e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D8E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D8E FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d8e OCA], [https://pdbe.org/2d8e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d8e RCSB], [https://www.ebi.ac.uk/pdbsum/2d8e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d8e ProSAT], [https://www.topsan.org/Proteins/RSGI/2d8e TOPSAN]</span></td></tr>
{{STRUCTURE_2d8e|  PDB=2d8e |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5SLA5_THET8 Q5SLA5_THET8]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d8/2d8e_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d8e ConSurf].
<div style="clear:both"></div>


===Structure of Chorismate Mutase (Form II) from Thermus Thermophilus HB8===
==See Also==
 
*[[3D structures of chorismate mutase|3D structures of chorismate mutase]]
 
__TOC__
==About this Structure==
</StructureSection>
2D8E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D8E OCA].
[[Category: Large Structures]]
[[Category: Chorismate mutase]]
[[Category: Thermus thermophilus HB8]]
[[Category: Single protein]]
[[Category: Bagautdinov B]]
[[Category: Thermus thermophilus]]
[[Category: Kunishima N]]
[[Category: Bagautdinov, B.]]
[[Category: Kunishima, N.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Chorismate mutase]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: X-ray diffraction]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 21:38:42 2008''

Latest revision as of 11:24, 25 October 2023

Structure of Chorismate Mutase (Form II) from Thermus Thermophilus HB8Structure of Chorismate Mutase (Form II) from Thermus Thermophilus HB8

Structural highlights

2d8e is a 1 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.75Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SLA5_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2d8e, resolution 1.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2d8e&oldid=3923774"