2d30: Difference between revisions

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{{Seed}}
[[Image:2d30.png|left|200px]]


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==Crystal Structure of Cytidine Deaminase Cdd-2 (BA4525) from Bacillus Anthracis at 2.40A Resolution==
The line below this paragraph, containing "STRUCTURE_2d30", creates the "Structure Box" on the page.
<StructureSection load='2d30' size='340' side='right'caption='[[2d30]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2d30]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D30 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D30 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2d30| PDB=2d30 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d30 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d30 OCA], [https://pdbe.org/2d30 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d30 RCSB], [https://www.ebi.ac.uk/pdbsum/2d30 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d30 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A6L7GZQ8_BACAN A0A6L7GZQ8_BACAN] This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.[ARBA:ARBA00003949][RuleBase:RU364006]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/2d30_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d30 ConSurf].
<div style="clear:both"></div>


===Crystal Structure of Cytidine Deaminase Cdd-2 (BA4525) from Bacillus Anthracis at 2.40A Resolution===
==See Also==
 
*[[Deaminase 3D structures|Deaminase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2D30 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D30 OCA].
[[Category: Bacillus anthracis]]
[[Category: Bacillus anthracis]]
[[Category: Cytidine deaminase]]
[[Category: Large Structures]]
[[Category: Blagova, E V.]]
[[Category: Blagova EV]]
[[Category: Brannigan, J A.]]
[[Category: Brannigan JA]]
[[Category: Fogg, M J.]]
[[Category: Fogg MJ]]
[[Category: Levdikov, V M.]]
[[Category: Levdikov VM]]
[[Category: Moroz, O V.]]
[[Category: Moroz OV]]
[[Category: SPINE, Structural Proteomics in Europe.]]
[[Category: Wilkinson AJ]]
[[Category: Wilkinson, A J.]]
[[Category: Wilson KS]]
[[Category: Wilson, K S.]]
[[Category: Nucleoside]]
[[Category: Nucleotide]]
[[Category: Purine]]
[[Category: Pyrimidine]]
[[Category: Salvage of nucleosides and nucleotide]]
[[Category: Spine]]
[[Category: Structural genomic]]
[[Category: Structural proteomics in europe]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 03:08:41 2009''

Latest revision as of 11:23, 25 October 2023

Crystal Structure of Cytidine Deaminase Cdd-2 (BA4525) from Bacillus Anthracis at 2.40A ResolutionCrystal Structure of Cytidine Deaminase Cdd-2 (BA4525) from Bacillus Anthracis at 2.40A Resolution

Structural highlights

2d30 is a 2 chain structure with sequence from Bacillus anthracis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A6L7GZQ8_BACAN This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.[ARBA:ARBA00003949][RuleBase:RU364006]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2d30, resolution 2.40Å

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