1v6s: Difference between revisions

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New page: left|200px<br /><applet load="1v6s" size="450" color="white" frame="true" align="right" spinBox="true" caption="1v6s, resolution 1.50Å" /> '''Crystal Structure of...
 
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[[Image:1v6s.jpg|left|200px]]<br /><applet load="1v6s" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1v6s, resolution 1.50&Aring;" />
'''Crystal Structure of Phosphoglycerate Kinase from Thermus thermophilus HB8'''<br />


==About this Structure==
==Crystal Structure of Phosphoglycerate Kinase from Thermus thermophilus HB8==
1V6S is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with NA and GOL as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Phosphoglycerate_kinase Phosphoglycerate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.3 2.7.2.3] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1V6S OCA].  
<StructureSection load='1v6s' size='340' side='right'caption='[[1v6s]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
[[Category: Phosphoglycerate kinase]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[1v6s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V6S FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v6s OCA], [https://pdbe.org/1v6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v6s RCSB], [https://www.ebi.ac.uk/pdbsum/1v6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v6s ProSAT], [https://www.topsan.org/Proteins/RSGI/1v6s TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PGK_THET8 PGK_THET8]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v6/1v6s_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v6s ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Phosphoglycerate kinase 3D structures|Phosphoglycerate kinase 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Kunishima, N.]]
[[Category: Kunishima N]]
[[Category: Mizutani, H.]]
[[Category: Mizutani H]]
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
[[Category: GOL]]
[[Category: NA]]
[[Category: phosphoglycerate kinase]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomics]]
[[Category: thermus thermophilus]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 04:29:06 2007''

Latest revision as of 10:48, 25 October 2023

Crystal Structure of Phosphoglycerate Kinase from Thermus thermophilus HB8Crystal Structure of Phosphoglycerate Kinase from Thermus thermophilus HB8

Structural highlights

1v6s is a 2 chain structure with sequence from Thermus thermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

PGK_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1v6s, resolution 1.50Å

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