1iz9: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1iz9.jpg|left|200px]]<br /><applet load="1iz9" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="1iz9, resolution 2.00&Aring;" />
-'''Crystal Structure of Malate Dehydrogenase from Thermus thermophilus HB8'''<br />
-==About this Structure==
+==Crystal Structure of Malate Dehydrogenase from Thermus thermophilus HB8==
-IZ9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Active as [http://en.wikipedia.org/wiki/Malate_dehydrogenase Malate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.37 1.1.1.37] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IZ9 OCA].
+<StructureSection load='1iz9' size='340' side='right'caption='[[1iz9]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-[[Category: Malate dehydrogenase]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[1iz9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IZ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IZ9 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iz9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iz9 OCA], [https://pdbe.org/1iz9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iz9 RCSB], [https://www.ebi.ac.uk/pdbsum/1iz9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iz9 ProSAT], [https://www.topsan.org/Proteins/RSGI/1iz9 TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/MDH_THETH MDH_THETH] Catalyzes the reversible oxidation of malate to oxaloacetate.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iz/1iz9_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iz9 ConSurf].
+<div style="clear:both"></div>
+==See Also==
+*[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermus thermophilus]]
-[[Category: Hamada, K.]]
+[[Category: Hamada K]]
-[[Category: Hasegawa, T.]]
+[[Category: Hasegawa T]]
-[[Category: Hirose, R.]]
+[[Category: Hirose R]]
-[[Category: Kuramitsu, S.]]
+[[Category: Kuramitsu S]]
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+[[Category: Yamano A]]
-[[Category: Yamano, A.]]
-[[Category: riken structural genomics/proteomics initiative]]
-[[Category: rossman fold]]
-[[Category: rsgi]]
-[[Category: structural genomics]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:17:16 2008''