5ldb: Difference between revisions

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 ==Crystal Structure of Polyphosphate Kinase from Meiothermus ruber bound to ADP==
-<StructureSection load='5ldb' size='340' side='right' caption='[[5ldb]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+<StructureSection load='5ldb' size='340' side='right'caption='[[5ldb]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5ldb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Meiothermus_ruber_h328 Meiothermus ruber h328]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LDB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LDB FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5ldb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Meiothermus_ruber_H328 Meiothermus ruber H328]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LDB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LDB FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MrH_2468 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1297799 Meiothermus ruber H328])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ldb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ldb OCA], [http://pdbe.org/5ldb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ldb RCSB], [http://www.ebi.ac.uk/pdbsum/5ldb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ldb ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ldb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ldb OCA], [https://pdbe.org/5ldb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ldb RCSB], [https://www.ebi.ac.uk/pdbsum/5ldb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ldb ProSAT]</span></td></tr>
 </table>
 <div style="background-color:#fffaf0;">
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 ==See Also==
-*[[Phosphotransferase|Phosphotransferase]]
+*[[Phosphotransferase 3D structures|Phosphotransferase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Meiothermus ruber h328]]
+[[Category: Large Structures]]
-[[Category: Einsle, O]]
+[[Category: Meiothermus ruber H328]]
-[[Category: Gerhardt, S]]
+[[Category: Einsle O]]
-[[Category: Kemper, F]]
+[[Category: Gerhardt S]]
-[[Category: Schwarzer, N]]
+[[Category: Kemper F]]
-[[Category: Polyphosphate kinase]]
+[[Category: Schwarzer N]]
-[[Category: Transferase]]