6p2a: Difference between revisions
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==Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment== | ==Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment== | ||
<StructureSection load='6p2a' size='340' side='right'caption='[[6p2a]]' scene=''> | <StructureSection load='6p2a' size='340' side='right'caption='[[6p2a]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P2A OCA]. For a <b>guided tour on the structure components</b> use [ | <table><tr><td colspan='2'>[[6p2a]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4] and [https://en.wikipedia.org/wiki/Pseudomonas_phage_OBP Pseudomonas phage OBP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P2A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6P2A FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ELA:9-OCTADECENOIC+ACID'>ELA</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6p2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p2a OCA], [https://pdbe.org/6p2a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6p2a RCSB], [https://www.ebi.ac.uk/pdbsum/6p2a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6p2a ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/G9IA38_9CAUD G9IA38_9CAUD] [https://www.uniprot.org/uniprot/NEEDL_BPT4 NEEDL_BPT4] Tail-associated lysozyme of the baseplate hub that is essential for localized hydrolysis of bacterial cell wall necessary for viral DNA injection. The needle-like gp5 protein punctures the outer cell membrane and then digests the peptidoglycan cell wall in the periplasmic space. Involved in the tail assembly.<ref>PMID:12837775</ref> <ref>PMID:21129200</ref> | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Escherichia virus T4]] | |||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Pseudomonas phage OBP]] | |||
[[Category: Buth SA]] | [[Category: Buth SA]] | ||
[[Category: Leiman PG]] | [[Category: Leiman PG]] | ||
[[Category: Shneider MM]] | [[Category: Shneider MM]] | ||