6ash: Difference between revisions

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New page: '''Unreleased structure''' The entry 6ash is ON HOLD until Paper Publication Authors: Law, S., Aguda, A., Nguyen, N., Brayer, G., Bromme, D. Description: Crystal stucture of human Cath...
 
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'''Unreleased structure'''


The entry 6ash is ON HOLD  until Paper Publication
==Crystal structure of human Cathepsin K with a non-active site inhibitor at 1.42 Angstrom resolution==
<StructureSection load='6ash' size='340' side='right'caption='[[6ash]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[6ash]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ASH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ASH FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.423&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1XF:2-{[(CARBAMOYLSULFANYL)ACETYL]AMINO}BENZOIC+ACID'>1XF</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ash FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ash OCA], [https://pdbe.org/6ash PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ash RCSB], [https://www.ebi.ac.uk/pdbsum/6ash PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ash ProSAT]</span></td></tr>
</table>
== Disease ==
[https://www.uniprot.org/uniprot/CATK_HUMAN CATK_HUMAN] Defects in CTSK are the cause of pycnodysostosis (PKND) [MIM:[https://omim.org/entry/265800 265800]. PKND is an autosomal recessive osteochondrodysplasia characterized by osteosclerosis and short stature.<ref>PMID:8703060</ref> <ref>PMID:9529353</ref> <ref>PMID:10491211</ref> <ref>PMID:10878663</ref>
== Function ==
[https://www.uniprot.org/uniprot/CATK_HUMAN CATK_HUMAN] Closely involved in osteoclastic bone resorption and may participate partially in the disorder of bone remodeling. Displays potent endoprotease activity against fibrinogen at acid pH. May play an important role in extracellular matrix degradation.


Authors: Law, S., Aguda, A., Nguyen, N., Brayer, G., Bromme, D.
==See Also==
 
*[[Cathepsin 3D structures|Cathepsin 3D structures]]
Description: Crystal stucture of human Cathepsin K with a non-active site inhibitor at 1.42 Angstrom resolution
== References ==
[[Category: Unreleased Structures]]
<references/>
[[Category: Brayer, G]]
__TOC__
[[Category: Bromme, D]]
</StructureSection>
[[Category: Nguyen, N]]
[[Category: Homo sapiens]]
[[Category: Law, S]]
[[Category: Large Structures]]
[[Category: Aguda, A]]
[[Category: Aguda A]]
[[Category: Brayer G]]
[[Category: Bromme D]]
[[Category: Law S]]
[[Category: Nguyen N]]

Latest revision as of 17:24, 4 October 2023

Crystal structure of human Cathepsin K with a non-active site inhibitor at 1.42 Angstrom resolutionCrystal structure of human Cathepsin K with a non-active site inhibitor at 1.42 Angstrom resolution

Structural highlights

6ash is a 1 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.423Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Disease

CATK_HUMAN Defects in CTSK are the cause of pycnodysostosis (PKND) [MIM:265800. PKND is an autosomal recessive osteochondrodysplasia characterized by osteosclerosis and short stature.[1] [2] [3] [4]

Function

CATK_HUMAN Closely involved in osteoclastic bone resorption and may participate partially in the disorder of bone remodeling. Displays potent endoprotease activity against fibrinogen at acid pH. May play an important role in extracellular matrix degradation.

See Also

References

  1. Gelb BD, Shi GP, Chapman HA, Desnick RJ. Pycnodysostosis, a lysosomal disease caused by cathepsin K deficiency. Science. 1996 Aug 30;273(5279):1236-8. PMID:8703060
  2. Gelb BD, Willner JP, Dunn TM, Kardon NB, Verloes A, Poncin J, Desnick RJ. Paternal uniparental disomy for chromosome 1 revealed by molecular analysis of a patient with pycnodysostosis. Am J Hum Genet. 1998 Apr;62(4):848-54. PMID:9529353 doi:S0002-9297(07)60977-X
  3. Ho N, Punturieri A, Wilkin D, Szabo J, Johnson M, Whaley J, Davis J, Clark A, Weiss S, Francomano C. Mutations of CTSK result in pycnodysostosis via a reduction in cathepsin K protein. J Bone Miner Res. 1999 Oct;14(10):1649-53. PMID:10491211
  4. Haagerup A, Hertz JM, Christensen MF, Binderup H, Kruse TA. Cathepsin K gene mutations and 1q21 haplotypes in at patients with pycnodysostosis in an outbred population. Eur J Hum Genet. 2000 Jun;8(6):431-6. PMID:10878663 doi:10.1038/sj.ejhg.5200481

6ash, resolution 1.42Å

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