5v6d: Difference between revisions
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New page: '''Unreleased structure''' The entry 5v6d is ON HOLD Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Description: Crystal structure of nucleoside diphosphat... |
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The | ==Crystal structure of nucleoside diphosphate kinase from Neisseria gonorrhoeae in complex with citrate== | ||
<StructureSection load='5v6d' size='340' side='right'caption='[[5v6d]], [[Resolution|resolution]] 1.85Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[5v6d]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_NCCP11945 Neisseria gonorrhoeae NCCP11945]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5V6D FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5v6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v6d OCA], [https://pdbe.org/5v6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5v6d RCSB], [https://www.ebi.ac.uk/pdbsum/5v6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5v6d ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/NDK_NEIG2 NDK_NEIG2] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | |||
==See Also== | |||
*[[Nucleoside diphosphate kinase 3D structures|Nucleoside diphosphate kinase 3D structures]] | |||
__TOC__ | |||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Neisseria gonorrhoeae NCCP11945]] | |||
Latest revision as of 16:42, 4 October 2023
Crystal structure of nucleoside diphosphate kinase from Neisseria gonorrhoeae in complex with citrateCrystal structure of nucleoside diphosphate kinase from Neisseria gonorrhoeae in complex with citrate
Structural highlights
FunctionNDK_NEIG2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. See Also |
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