5ui9: Difference between revisions

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 ==Crystal Structure of an Oxidoreductase from Agrobacterium radiobacter in Complex with NAD+, 2 -hydroxy-2-hydroxymethyl propanoic acid and Magnesium==
-<StructureSection load='5ui9' size='340' side='right' caption='[[5ui9]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
+<StructureSection load='5ui9' size='340' side='right'caption='[[5ui9]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5ui9]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UI9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UI9 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5ui9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_radiobacter_K84 Agrobacterium radiobacter K84]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UI9 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8A1:(2S)-2,3-DIHYDROXY-2-METHYLPROPANOIC+ACID'>8A1</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.92&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5uhw|5uhw]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8A1:(2S)-2,3-DIHYDROXY-2-METHYLPROPANOIC+ACID'>8A1</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ui9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ui9 OCA], [http://pdbe.org/5ui9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ui9 RCSB], [http://www.ebi.ac.uk/pdbsum/5ui9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ui9 ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ui9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ui9 OCA], [https://pdbe.org/5ui9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ui9 RCSB], [https://www.ebi.ac.uk/pdbsum/5ui9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ui9 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/APSD_AGRRK APSD_AGRRK] Involved in catabolism of D-apiose. Catalyzes oxidation of D-apiose to D-apionolactone.<ref>PMID:29867142</ref>
+== References ==
+<references/>
 __TOC__
 </StructureSection>
-[[Category: Almo, S C]]
+[[Category: Agrobacterium radiobacter K84]]
-[[Category: Bonanno, J B]]
+[[Category: Large Structures]]
-[[Category: Cook, W J]]
+[[Category: Almo SC]]
-[[Category: Fedorov, E]]
+[[Category: Bonanno JB]]
-[[Category: Gerlt, J A]]
+[[Category: Cook WJ]]
-[[Category: Huang, H]]
+[[Category: Fedorov AA]]
-[[Category: Zhang, X]]
+[[Category: Fedorov EV]]
-[[Category: 2-hydroxy-2-hydroxymethyl propanoic acid]]
+[[Category: Gerlt JA]]
-[[Category: Oxidoreductase]]
+[[Category: Huang H]]