5t4j: Difference between revisions
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<StructureSection load='5t4j' size='340' side='right'caption='[[5t4j]], [[Resolution|resolution]] 2.23Å' scene=''> | <StructureSection load='5t4j' size='340' side='right'caption='[[5t4j]], [[Resolution|resolution]] 2.23Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5t4j]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[5t4j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5T4J FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.231Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ABU:GAMMA-AMINO-BUTANOIC+ACID'>ABU</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5t4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t4j OCA], [https://pdbe.org/5t4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5t4j RCSB], [https://www.ebi.ac.uk/pdbsum/5t4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5t4j ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/GABR_BACSU GABR_BACSU] Activates the transcription of the gabTD operon. Is also a repressor of its own expression, both in the presence and absence of GABA. Binds specifically to the DNA region overlapping the -35 region of the gabT promoter and the -10 and +1 regions of the gabR promoter. Principally regulates the utilization of gamma-aminobutyrate.<ref>PMID:12123465</ref> <ref>PMID:15223311</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 5t4j" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5t4j" style="background-color:#fffaf0;"></div> | ||
==See Also== | |||
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Bacillus subtilis]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Belitsky | [[Category: Belitsky BR]] | ||
[[Category: Farley | [[Category: Farley M]] | ||
[[Category: Juncosa | [[Category: Juncosa JI]] | ||
[[Category: Le | [[Category: Le HV]] | ||
[[Category: Lehrer | [[Category: Lehrer HJS]] | ||
[[Category: Liu | [[Category: Liu D]] | ||
[[Category: Petsko | [[Category: Petsko GA]] | ||
[[Category: Ringe | [[Category: Ringe D]] | ||
[[Category: Sanishvili | [[Category: Sanishvili R]] | ||
[[Category: Silverman | [[Category: Silverman RB]] | ||
[[Category: Wu | [[Category: Wu R]] | ||