5t25: Difference between revisions

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 ==Kinetic, Spectral and Structural Characterization of the Slow Binding Inhibitor Acetopyruvate with Dihydrodipicolinate Synthase from Escherichia coli.==
-<StructureSection load='5t25' size='340' side='right' caption='[[5t25]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
+<StructureSection load='5t25' size='340' side='right'caption='[[5t25]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5t25]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eco8a Eco8a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T25 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5T25 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5t25]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_IAI1 Escherichia coli IAI1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5T25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5T25 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.991&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=74P:(E)-N~6~-(1-CARBOXY-3-OXOBUTYLIDENE)-L-LYSINE'>74P</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=74P:(E)-N~6~-(1-CARBOXY-3-OXOBUTYLIDENE)-L-LYSINE'>74P</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5t26|5t26]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5t25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t25 OCA], [https://pdbe.org/5t25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5t25 RCSB], [https://www.ebi.ac.uk/pdbsum/5t25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5t25 ProSAT]</span></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dapA, ECIAI1_2529 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=585034 ECO8A])</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5t25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5t25 OCA], [http://pdbe.org/5t25 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5t25 RCSB], [http://www.ebi.ac.uk/pdbsum/5t25 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5t25 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/DAPA_ECO8A DAPA_ECO8A]] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[HAMAP-Rule:MF_00418]
+[https://www.uniprot.org/uniprot/DAPA_ECO8A DAPA_ECO8A] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[HAMAP-Rule:MF_00418]
+==See Also==
+*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
 __TOC__
 </StructureSection>
-[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]
+[[Category: Escherichia coli IAI1]]
-[[Category: Eco8a]]
+[[Category: Large Structures]]
-[[Category: Chooback, L]]
+[[Category: Chooback L]]
-[[Category: Fleming, C D]]
+[[Category: Fleming CD]]
-[[Category: Karsten, W E]]
+[[Category: Karsten WE]]
-[[Category: Seabourn, P]]
+[[Category: Seabourn P]]
-[[Category: Thomas, L M]]
+[[Category: Thomas LM]]
-[[Category: Acetopyruvate modification]]
-[[Category: Dihydrodipicolinate synthase]]
-[[Category: Hydrolase]]
-[[Category: Kinetic]]