5kyo: Difference between revisions

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'''Unreleased structure'''


The entry 5kyo is ON HOLD
==Crystal Structure of CYP101J2==
<StructureSection load='5kyo' size='340' side='right'caption='[[5kyo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5kyo]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingobium_yanoikuyae Sphingobium yanoikuyae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KYO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KYO FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kyo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kyo OCA], [https://pdbe.org/5kyo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kyo RCSB], [https://www.ebi.ac.uk/pdbsum/5kyo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kyo ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A1C9CIU0_SPHYA A0A1C9CIU0_SPHYA]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The cytochrome P450 monooxygenases (P450s) catalyse a vast array of oxygenation reactions that can be useful in biocatalytic applications. CYP101J2 from Sphingobium yanoikuyae is a P450 that catalyses the hydroxylation of 1,8-cineole. Here we report the crystallisation and X-ray structure elucidation of recombinant CYP101J2 to 1.8 A resolution. The CYP101J2 structure shows the canonical P450-fold and has an open conformation in the absence of substrate. Analysis of the structure revealed that CYP101J2, in the absence of substrate, forms a well-ordered substrate-binding channel that suggests a unique form of substrate guidance in comparison to other bacterial 1,8-cineole-hydroxylating P450 enzymes. This article is protected by copyright. All rights reserved.


Authors: Unterweger, B., Drinkwater, N., Dumsday, G.J., McGowan, S.
X-ray crystal structure of cytochrome P450 monooxygenase CYP101J2 from Sphingobium yanoikuyae strain B2.,Unterweger B, Drinkwater N, Johanesen P, Lyras D, Dumsday GJ, McGowan S Proteins. 2016 Dec 9. doi: 10.1002/prot.25227. PMID:27936485<ref>PMID:27936485</ref>


Description: Crystal Structure of CYP101J2
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Dumsday, G.J]]
<div class="pdbe-citations 5kyo" style="background-color:#fffaf0;"></div>
[[Category: Drinkwater, N]]
 
[[Category: Unterweger, B]]
==See Also==
[[Category: Mcgowan, S]]
*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Sphingobium yanoikuyae]]
[[Category: Drinkwater N]]
[[Category: Dumsday GJ]]
[[Category: McGowan S]]
[[Category: Unterweger B]]

Latest revision as of 15:45, 4 October 2023

Crystal Structure of CYP101J2Crystal Structure of CYP101J2

Structural highlights

5kyo is a 6 chain structure with sequence from Sphingobium yanoikuyae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A1C9CIU0_SPHYA

Publication Abstract from PubMed

The cytochrome P450 monooxygenases (P450s) catalyse a vast array of oxygenation reactions that can be useful in biocatalytic applications. CYP101J2 from Sphingobium yanoikuyae is a P450 that catalyses the hydroxylation of 1,8-cineole. Here we report the crystallisation and X-ray structure elucidation of recombinant CYP101J2 to 1.8 A resolution. The CYP101J2 structure shows the canonical P450-fold and has an open conformation in the absence of substrate. Analysis of the structure revealed that CYP101J2, in the absence of substrate, forms a well-ordered substrate-binding channel that suggests a unique form of substrate guidance in comparison to other bacterial 1,8-cineole-hydroxylating P450 enzymes. This article is protected by copyright. All rights reserved.

X-ray crystal structure of cytochrome P450 monooxygenase CYP101J2 from Sphingobium yanoikuyae strain B2.,Unterweger B, Drinkwater N, Johanesen P, Lyras D, Dumsday GJ, McGowan S Proteins. 2016 Dec 9. doi: 10.1002/prot.25227. PMID:27936485[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Unterweger B, Drinkwater N, Johanesen P, Lyras D, Dumsday GJ, McGowan S. X-ray crystal structure of cytochrome P450 monooxygenase CYP101J2 from Sphingobium yanoikuyae strain B2. Proteins. 2016 Dec 9. doi: 10.1002/prot.25227. PMID:27936485 doi:http://dx.doi.org/10.1002/prot.25227

5kyo, resolution 1.80Å

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