5kxe: Difference between revisions

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 ==Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 4.2==
-<StructureSection load='5kxe' size='340' side='right' caption='[[5kxe]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
+<StructureSection load='5kxe' size='340' side='right'caption='[[5kxe]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5kxe]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Wisteria_floribunda Wisteria floribunda]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KXE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KXE FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5kxe]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Wisteria_floribunda Wisteria floribunda]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KXE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KXE FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6Y2:~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-ACETAMIDO-2-(HYDROXYMETHYL)-6-(4-NITROPHENOXY)-4-OXIDANYL-OXAN-3-YL]OXY-6-(HYDROXYMETHYL)-4,5-BIS(OXIDANYL)OXAN-3-YL]ETHANAMIDE'>6Y2</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kxb|5kxb]], [[5kxc|5kxc]], [[5kxd|5kxd]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6Y2:~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-ACETAMIDO-2-(HYDROXYMETHYL)-6-(4-NITROPHENOXY)-4-OXIDANYL-OXAN-3-YL]OXY-6-(HYDROXYMETHYL)-4,5-BIS(OXIDANYL)OXAN-3-YL]ETHANAMIDE'>6Y2</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kxe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kxe OCA], [http://pdbe.org/5kxe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kxe RCSB], [http://www.ebi.ac.uk/pdbsum/5kxe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kxe ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kxe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kxe OCA], [https://pdbe.org/5kxe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kxe RCSB], [https://www.ebi.ac.uk/pdbsum/5kxe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kxe ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A0A1D5B395_WISFL A0A1D5B395_WISFL]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 19: / Line 21: @@
 ==See Also==
-*[[Agglutinin|Agglutinin]]
+*[[Agglutinin 3D structures|Agglutinin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Wisteria floribunda]]
-[[Category: Evans, S V]]
+[[Category: Evans SV]]
-[[Category: Haji-Ghassemi, O]]
+[[Category: Haji-Ghassemi O]]
-[[Category: Carbohydrate-binding protein]]
-[[Category: Lectin]]
-[[Category: Sugar binding protein-inhibitor complex]]