5knc: Difference between revisions

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 ==Crystal structure of the 3 ADP-bound V1 complex==
-<StructureSection load='5knc' size='340' side='right' caption='[[5knc]], [[Resolution|resolution]] 3.02&Aring;' scene=''>
+<StructureSection load='5knc' size='340' side='right'caption='[[5knc]], [[Resolution|resolution]] 3.02&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5knc]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KNC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KNC FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5knc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_hirae_ATCC_9790 Enterococcus hirae ATCC 9790]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KNC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KNC FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.015&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5knb|5knb]], [[5knd|5knd]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sodium-transporting_two-sector_ATPase Sodium-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.15 3.6.3.15] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5knc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5knc OCA], [https://pdbe.org/5knc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5knc RCSB], [https://www.ebi.ac.uk/pdbsum/5knc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5knc ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5knc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5knc OCA], [http://pdbe.org/5knc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5knc RCSB], [http://www.ebi.ac.uk/pdbsum/5knc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5knc ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/NTPG_ENTHA NTPG_ENTHA]] Involved in ATP-driven sodium extrusion. [[http://www.uniprot.org/uniprot/NTPA_ENTHA NTPA_ENTHA]] Involved in ATP-driven sodium extrusion. [[http://www.uniprot.org/uniprot/NTPD_ENTHA NTPD_ENTHA]] Involved in ATP-driven sodium extrusion.<ref>PMID:8157629</ref>  [[http://www.uniprot.org/uniprot/NTPB_ENTHA NTPB_ENTHA]] Involved in ATP-driven sodium extrusion.
+[https://www.uniprot.org/uniprot/NTPA_ENTHA NTPA_ENTHA] Involved in ATP-driven sodium extrusion.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 19: @@
 </div>
 <div class="pdbe-citations 5knc" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[ATPase 3D structures|ATPase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Sodium-transporting two-sector ATPase]]
+[[Category: Enterococcus hirae ATCC 9790]]
-[[Category: Imai, F L]]
+[[Category: Large Structures]]
-[[Category: Ishizuka-Katsura, Y]]
+[[Category: Imai FL]]
-[[Category: Kakinuma, Y]]
+[[Category: Ishizuka-Katsura Y]]
-[[Category: Maruyama, S]]
+[[Category: Kakinuma Y]]
-[[Category: Mizutani, K]]
+[[Category: Maruyama S]]
-[[Category: Muneyuki, E]]
+[[Category: Mizutani K]]
-[[Category: Murata, T]]
+[[Category: Muneyuki E]]
-[[Category: Shimono, K]]
+[[Category: Murata T]]
-[[Category: Shirouzu, M]]
+[[Category: Shimono K]]
-[[Category: Suzuki, K]]
+[[Category: Shirouzu M]]
-[[Category: Yamato, I]]
+[[Category: Suzuki K]]
-[[Category: Yokoyama, S]]
+[[Category: Yamato I]]
-[[Category: Atp binding]]
+[[Category: Yokoyama S]]
-[[Category: Hydrolase]]
-[[Category: P-loop]]