5br8: Difference between revisions

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'''Unreleased structure'''


The entry 5br8 is ON HOLD  until May 29 2017
==Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin==
<StructureSection load='5br8' size='340' side='right'caption='[[5br8]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5br8]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BR8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BR8 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0TD:(3S)-3-(METHYLSULFANYL)-L-ASPARTIC+ACID'>0TD</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=4OC:4N,O2-METHYLCYTIDINE-5-MONOPHOSPHATE'>4OC</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=G7M:N7-METHYL-GUANOSINE-5-MONOPHOSPHATE'>G7M</scene>, <scene name='pdbligand=M2G:N2-DIMETHYLGUANOSINE-5-MONOPHOSPHATE'>M2G</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PAR:PAROMOMYCIN'>PAR</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=UR3:3-METHYLURIDINE-5-MONOPHOSHATE'>UR3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5br8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5br8 OCA], [https://pdbe.org/5br8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5br8 RCSB], [https://www.ebi.ac.uk/pdbsum/5br8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5br8 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RS2_THET8 RS2_THET8] Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B]


Authors: Sierra, R.G., Gati, C., Laksmono, H., Dao, E.H., Gul, S., Fuller, F., Kern, J., Chatterjee, R., Ibrahim, M., Brewster, A., Young, I.D., Michels-Clark, T., Aquila, A., Mengning, L., Hunter, M.S., Koglin, J.E., Boutet, S., Junco, E.A., Hayes, B., Bogan, M.J., Hampton, C.Y., Puglisi, E.V., Sauter, N.K., Stan, C.A., Zouni, A., Yano, J., Yachandra, V.K., Soltis, S.M., Puglisi, J.D., DeMirci, H.
==See Also==
 
*[[Ribosomal protein THX 3D structures|Ribosomal protein THX 3D structures]]
Description:  
__TOC__
[[Category: Unreleased Structures]]
</StructureSection>
[[Category: Brewster, A]]
[[Category: Large Structures]]
[[Category: Ibrahim, M]]
[[Category: Thermus thermophilus HB8]]
[[Category: Zouni, A]]
[[Category: Aquila A]]
[[Category: Kern, J]]
[[Category: Bogan MJ]]
[[Category: Hunter, M.S]]
[[Category: Boutet S]]
[[Category: Puglisi, J.D]]
[[Category: Brewster A]]
[[Category: Soltis, S.M]]
[[Category: Chatterjee R]]
[[Category: Young, I.D]]
[[Category: Dao EH]]
[[Category: Chatterjee, R]]
[[Category: DeMirci H]]
[[Category: Mengning, L]]
[[Category: Fuller F]]
[[Category: Hayes, B]]
[[Category: Gati C]]
[[Category: Koglin, J.E]]
[[Category: Gul S]]
[[Category: Fuller, F]]
[[Category: Hampton CY]]
[[Category: Puglisi, E.V]]
[[Category: Hayes B]]
[[Category: Gati, C]]
[[Category: Hunter MS]]
[[Category: Aquila, A]]
[[Category: Ibrahim M]]
[[Category: Boutet, S]]
[[Category: Junco EA]]
[[Category: Michels-Clark, T]]
[[Category: Kern J]]
[[Category: Hampton, C.Y]]
[[Category: Koglin JE]]
[[Category: Sierra, R.G]]
[[Category: Laksmono H]]
[[Category: Sauter, N.K]]
[[Category: Mengning L]]
[[Category: Laksmono, H]]
[[Category: Michels-Clark T]]
[[Category: Stan, C.A]]
[[Category: Puglisi EV]]
[[Category: Dao, E.H]]
[[Category: Puglisi JD]]
[[Category: Yano, J]]
[[Category: Sauter NK]]
[[Category: Bogan, M.J]]
[[Category: Sierra RG]]
[[Category: Demirci, H]]
[[Category: Soltis SM]]
[[Category: Yachandra, V.K]]
[[Category: Stan CA]]
[[Category: Gul, S]]
[[Category: Yachandra VK]]
[[Category: Junco, E.A]]
[[Category: Yano J]]
[[Category: Young ID]]
[[Category: Zouni A]]

Latest revision as of 11:28, 27 September 2023

Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycinAmbient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin

Structural highlights

5br8 is a 10 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.4Å
Ligands:, , , , , , , , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RS2_THET8 Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B]

See Also

5br8, resolution 3.40Å

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