4xv0: Difference between revisions

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<StructureSection load='4xv0' size='340' side='right'caption='[[4xv0]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
<StructureSection load='4xv0' size='340' side='right'caption='[[4xv0]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4xv0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Hypjq Hypjq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XV0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XV0 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4xv0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichoderma_reesei_QM6a Trichoderma reesei QM6a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XV0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XV0 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9697&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TRIREDRAFT_120229 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=431241 HYPJQ])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xv0 OCA], [https://pdbe.org/4xv0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xv0 RCSB], [https://www.ebi.ac.uk/pdbsum/4xv0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xv0 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xv0 OCA], [http://pdbe.org/4xv0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xv0 RCSB], [http://www.ebi.ac.uk/pdbsum/4xv0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xv0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/XYN3_HYPJQ XYN3_HYPJQ] Glycoside hydrolase involved in the hydrolysis of xylan, a major plant cell wall hemicellulose made up of 1,4-beta-linked D-xylopyranose residues. Catalyzes the endohydrolysis of the main-chain 1,4-beta-glycosidic bonds connecting the xylose subunits yielding various xylooligosaccharides and xylose. Produces xylobiose and xylotriose as the main degradation products.[UniProtKB:Q9P973]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Endo-1,4-beta-xylanase]]
[[Category: Hypjq]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Cui, H]]
[[Category: Trichoderma reesei QM6a]]
[[Category: Savchenko, A]]
[[Category: Cui H]]
[[Category: Stogios, P J]]
[[Category: Savchenko A]]
[[Category: Xu, X]]
[[Category: Stogios PJ]]
[[Category: Alpha8/beta8 fold]]
[[Category: Xu X]]
[[Category: Fungus]]
[[Category: Gh10]]
[[Category: Glycoside hydrolase family 10]]
[[Category: Hydrolase]]
[[Category: Tim barrel]]
[[Category: Xylanase]]

Latest revision as of 10:50, 27 September 2023

Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Trichoderma reeseiCrystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Trichoderma reesei

Structural highlights

4xv0 is a 1 chain structure with sequence from Trichoderma reesei QM6a. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9697Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

XYN3_HYPJQ Glycoside hydrolase involved in the hydrolysis of xylan, a major plant cell wall hemicellulose made up of 1,4-beta-linked D-xylopyranose residues. Catalyzes the endohydrolysis of the main-chain 1,4-beta-glycosidic bonds connecting the xylose subunits yielding various xylooligosaccharides and xylose. Produces xylobiose and xylotriose as the main degradation products.[UniProtKB:Q9P973]

4xv0, resolution 1.97Å

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