4wkm: Difference between revisions

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OCA

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 ==AmpR effector binding domain from Citrobacter freundii bound to UDP-MurNAc-pentapeptide==
-<StructureSection load='4wkm' size='340' side='right' caption='[[4wkm]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
+<StructureSection load='4wkm' size='340' side='right'caption='[[4wkm]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4wkm]] is a 16 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WKM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WKM FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4wkm]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrobacter_freundii_ATCC_8090_=_MTCC_1658_=_NBRC_12681 Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WKM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WKM FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MUB:N-ACETYLMURAMIC+ACID'>MUB</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=API:2,6-DIAMINOPIMELIC+ACID'>API</scene>, <scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=FGA:GAMMA-D-GLUTAMIC+ACID'>FGA</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=API:2,6-DIAMINOPIMELIC+ACID'>API</scene>, <scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=FGA:GAMMA-D-GLUTAMIC+ACID'>FGA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MUB:N-ACETYLMURAMIC+ACID'>MUB</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3kos|3kos]], [[3kot|3kot]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wkm OCA], [https://pdbe.org/4wkm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wkm RCSB], [https://www.ebi.ac.uk/pdbsum/4wkm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wkm ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wkm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wkm OCA], [http://pdbe.org/4wkm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wkm RCSB], [http://www.ebi.ac.uk/pdbsum/4wkm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4wkm ProSAT]</span></td></tr>
 </table>
 <div style="background-color:#fffaf0;">
@@ Line 18: / Line 17: @@
 </div>
 <div class="pdbe-citations 4wkm" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Mark, B L]]
+[[Category: Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681]]
-[[Category: Reeve, T M]]
+[[Category: Large Structures]]
-[[Category: Vadlamani, G]]
+[[Category: Mark BL]]
-[[Category: Lttr]]
+[[Category: Reeve TM]]
-[[Category: Lysr-type transcriptional regulator]]
+[[Category: Vadlamani G]]
-[[Category: Transcription]]
-[[Category: Udp-murnac-pentapeptide]]