1yyj: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==The NMR solution structure of a redesigned apocytochrome b562:Rd-apocyt b562==
-<StructureSection load='1yyj' size='340' side='right' caption='[[1yyj]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''>
+<StructureSection load='1yyj' size='340' side='right'caption='[[1yyj]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1yyj]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YYJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YYJ FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1yyj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YYJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YYJ FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1rac|1rac]], [[1yyx|1yyx]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yyj OCA], [http://pdbe.org/1yyj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yyj RCSB], [http://www.ebi.ac.uk/pdbsum/1yyj PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yyj OCA], [https://pdbe.org/1yyj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yyj RCSB], [https://www.ebi.ac.uk/pdbsum/1yyj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yyj ProSAT]</span></td></tr>
 </table>
 == Evolutionary Conservation ==
@@ Line 10: / Line 11: @@
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/1yyj_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/1yyj_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yyj ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 29: / Line 30: @@
 __TOC__
 </StructureSection>
-[[Category: Structural genomic]]
+[[Category: Homo sapiens]]
-[[Category: Bai, Y]]
+[[Category: Large Structures]]
-[[Category: Feng, H]]
+[[Category: Bai Y]]
-[[Category: Lipsitz, R]]
+[[Category: Feng H]]
-[[Category: Takei, J]]
+[[Category: Lipsitz R]]
-[[Category: Tjandra, N]]
+[[Category: Takei J]]
-[[Category: Bsgc]]
+[[Category: Tjandra N]]
-[[Category: De novo protein]]
-[[Category: Four helix protein]]
-[[Category: PSI, Protein structure initiative]]