5jjv: Difference between revisions

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 ==Crystal structure of XerH site-specific recombinase bound to palindromic difH substrate: post-cleavage complex==
-<StructureSection load='5jjv' size='340' side='right' caption='[[5jjv]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+<StructureSection load='5jjv' size='340' side='right'caption='[[5jjv]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5jjv]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Campylobacter_pylori Campylobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JJV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JJV FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5jjv]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JJV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JJV FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xerH, HP_0675 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85962 Campylobacter pylori])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jjv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jjv OCA], [http://pdbe.org/5jjv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jjv RCSB], [http://www.ebi.ac.uk/pdbsum/5jjv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jjv ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jjv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jjv OCA], [https://pdbe.org/5jjv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jjv RCSB], [https://www.ebi.ac.uk/pdbsum/5jjv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jjv ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/XERH_HELPY XERH_HELPY]] Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Involved in chromosome segregation. May contribute to chromosome decatenation.<ref>PMID:22511919</ref>
+[https://www.uniprot.org/uniprot/XERH_HELPY XERH_HELPY] Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Involved in chromosome segregation. May contribute to chromosome decatenation.<ref>PMID:22511919</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 21: @@
 ==See Also==
-*[[Resolvase|Resolvase]]
+*[[Resolvase 3D structures|Resolvase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Campylobacter pylori]]
+[[Category: Helicobacter pylori 26695]]
-[[Category: Barabas, O]]
+[[Category: Large Structures]]
-[[Category: Bebel, A]]
+[[Category: Barabas O]]
-[[Category: Cell cycle]]
+[[Category: Bebel A]]
-[[Category: Chromosome dimer resolution]]
-[[Category: Recombination]]
-[[Category: Site-specific recombinase]]
-[[Category: Tyrosine recombinase]]
-[[Category: Xer]]