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4v45: Difference between revisions

New page: ==E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE== <StructureSection load='4v45' size='340' side='right' caption='4v45, resolution 2.60&Ari...
 
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==E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE==
==E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE==
<StructureSection load='4v45' size='340' side='right' caption='[[4v45]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='4v45' size='340' side='right'caption='[[4v45]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4v45]] is a 16 chain structure. This structure supersedes and combines the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1jz0 1jz0] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1jz1 1jz1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V45 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4V45 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4v45]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1jz0 1jz0] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1jz1 1jz1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V45 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V45 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2FG:2-FLUORO-2-DEOXY-BETA-D-GALACTOPYRANOSE'>2FG</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2FG:2-FLUORO-2-DEOXY-BETA-D-GALACTOPYRANOSE'>2FG</scene>, <scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1jz0|1jz0]], [[1jz1|1jz1]], [[1dp0|1dp0]], [[1f49|1f49]], [[1jyn|1jyn]], [[1jyv|1jyv]], [[1jyw|1jyw]], [[1jyx|1jyx]], [[1jyy|1jyy]], [[1jyz|1jyz]], [[1jz2|1jz2]], [[1jz3|1jz3]], [[1jz4|1jz4]], [[1jz5|1jz5]], [[1jz6|1jz6]], [[1jz7|1jz7]], [[1jz8|1jz8]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v45 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v45 OCA], [https://pdbe.org/4v45 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v45 RCSB], [https://www.ebi.ac.uk/pdbsum/4v45 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v45 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4v45 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v45 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4v45 RCSB], [http://www.ebi.ac.uk/pdbsum/4v45 PDBsum]</span></td></tr>
</table>
</table>
{{Large structure}}
== Function ==
[https://www.uniprot.org/uniprot/BGAL_ECOLI BGAL_ECOLI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 4v45" style="background-color:#fffaf0;"></div>
==See Also==
*[[Galactosidase 3D structures|Galactosidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Beta-galactosidase]]
[[Category: Escherichia coli]]
[[Category: Juers, D H]]
[[Category: Large Structures]]
[[Category: Matthews, B W]]
[[Category: Juers DH]]
[[Category: McCarter, J D]]
[[Category: Matthews BW]]
[[Category: Withers, S G]]
[[Category: McCarter JD]]
[[Category: Beta supersandwich]]
[[Category: Withers SG]]
[[Category: Hydrolase]]
[[Category: Immunoglobulin]]
[[Category: Jelly-roll barrel]]

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