4nhk: Difference between revisions

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 ==Crystal structure of Tpa1p from Saccharomyces cerevisiae, termination and polyadenylation protein 1, in complex with pyridine-2,4-dicarboxylic acid (2,4-PDCA)==
-<StructureSection load='4nhk' size='340' side='right' caption='[[4nhk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='4nhk' size='340' side='right'caption='[[4nhk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4nhk]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NHK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NHK FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4nhk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NHK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NHK FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PD2:PYRIDINE-2,4-DICARBOXYLIC+ACID'>PD2</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4nhm|4nhm]], [[4nhn|4nhn]], [[4nhx|4nhx]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PD2:PYRIDINE-2,4-DICARBOXYLIC+ACID'>PD2</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4nhk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nhk OCA], [http://pdbe.org/4nhk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4nhk RCSB], [http://www.ebi.ac.uk/pdbsum/4nhk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4nhk ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4nhk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4nhk OCA], [https://pdbe.org/4nhk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4nhk RCSB], [https://www.ebi.ac.uk/pdbsum/4nhk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4nhk ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/TPA1_YEAST TPA1_YEAST]] Part of a messenger ribonucleoprotein (mRNP) complex at the 3'-UTR of mRNAs. It associates specifically with components of the translation termination complex and is involved in both translation termination and in regulation of normal mRNA decay through translation termination-coupled poly(A) shortening.<ref>PMID:16809762</ref>
+[https://www.uniprot.org/uniprot/TPA1_YEAST TPA1_YEAST] Part of a messenger ribonucleoprotein (mRNP) complex at the 3'-UTR of mRNAs. It associates specifically with components of the translation termination complex and is involved in both translation termination and in regulation of normal mRNA decay through translation termination-coupled poly(A) shortening.<ref>PMID:16809762</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
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 __TOC__
 </StructureSection>
-[[Category: McDonough, M A]]
+[[Category: Large Structures]]
-[[Category: Schofield, C J]]
+[[Category: Saccharomyces cerevisiae S288C]]
-[[Category: Scotti, J S]]
+[[Category: McDonough MA]]
-[[Category: 2-oxoglutarate oxygenase]]
+[[Category: Schofield CJ]]
-[[Category: Double-stranded beta helix]]
+[[Category: Scotti JS]]
-[[Category: Jellyroll fold]]
-[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]
-[[Category: Oxygen sensing]]
-[[Category: Prolyl hydroxylase]]
-[[Category: Protein synthesis regulation]]
-[[Category: Ribosome]]
-[[Category: Translation]]