4mlo: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==1.65A resolution structure of ToxT from Vibrio cholerae (P21 Form)==
==1.65A resolution structure of ToxT from Vibrio cholerae (P21 Form)==
<StructureSection load='4mlo' size='340' side='right' caption='[[4mlo]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='4mlo' size='340' side='right'caption='[[4mlo]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4mlo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MLO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MLO FirstGlance]. <br>
<table><tr><td colspan='2'>[[4mlo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MLO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MLO FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PAM:PALMITOLEIC+ACID'>PAM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">toxT ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PAM:PALMITOLEIC+ACID'>PAM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mlo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mlo OCA], [http://pdbe.org/4mlo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4mlo RCSB], [http://www.ebi.ac.uk/pdbsum/4mlo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4mlo ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mlo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mlo OCA], [https://pdbe.org/4mlo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mlo RCSB], [https://www.ebi.ac.uk/pdbsum/4mlo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mlo ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q7BGC0_VIBCL Q7BGC0_VIBCL]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 19:
</div>
</div>
<div class="pdbe-citations 4mlo" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4mlo" style="background-color:#fffaf0;"></div>
==See Also==
*[[ToxT|ToxT]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillo virgola del koch trevisan 1884]]
[[Category: Large Structures]]
[[Category: Battaile, K P]]
[[Category: Vibrio cholerae]]
[[Category: Egan, S]]
[[Category: Battaile KP]]
[[Category: Li, J]]
[[Category: Egan S]]
[[Category: Lovell, S]]
[[Category: Li J]]
[[Category: Wehmeyer, G]]
[[Category: Lovell S]]
[[Category: Dna binding]]
[[Category: Wehmeyer G]]
[[Category: Toxt]]
[[Category: Transcription regulator]]

Latest revision as of 19:39, 20 September 2023

1.65A resolution structure of ToxT from Vibrio cholerae (P21 Form)1.65A resolution structure of ToxT from Vibrio cholerae (P21 Form)

Structural highlights

4mlo is a 1 chain structure with sequence from Vibrio cholerae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.65Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q7BGC0_VIBCL

Publication Abstract from PubMed

ToxT is an AraC-family transcriptional activator protein that controls the expression of key virulence factors in Vibrio cholerae, the causative agent of cholera. ToxT directly activates the expression of the genes that encode the toxin-coregulated pilus and cholera toxin, and also positively auto-regulates its own expression from the tcp promoter. The crystal structure of ToxT has previously been solved at 1.9 A resolution (PDB entry 3gbg). In this study, a crystal structure of ToxT at 1.65 A resolution with a similar overall structure to the previously determined structure is reported. However, there are distinct differences between the two structures, particularly in the region that extends from Asp101 to Glu110. This region, which can influence ToxT activity but was disordered in the previous structure, can be traced entirely in the current structure.

1.65 A resolution structure of the AraC-family transcriptional activator ToxT from Vibrio cholerae.,Li J, Wehmeyer G, Lovell S, Battaile KP, Egan SM Acta Crystallogr F Struct Biol Commun. 2016 Sep;72(Pt 9):726-31. doi:, 10.1107/S2053230X1601298X. Epub 2016 Aug 26. PMID:27599865[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Li J, Wehmeyer G, Lovell S, Battaile KP, Egan SM. 1.65 A resolution structure of the AraC-family transcriptional activator ToxT from Vibrio cholerae. Acta Crystallogr F Struct Biol Commun. 2016 Sep;72(Pt 9):726-31. doi:, 10.1107/S2053230X1601298X. Epub 2016 Aug 26. PMID:27599865 doi:http://dx.doi.org/10.1107/S2053230X1601298X

4mlo, resolution 1.65Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA