4m6d: Difference between revisions

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==Crystal structure of the aptamer minF-lysozyme complex.==
==Crystal structure of the aptamer minF-lysozyme complex.==
<StructureSection load='4m6d' size='340' side='right' caption='[[4m6d]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
<StructureSection load='4m6d' size='340' side='right'caption='[[4m6d]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4m6d]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4M6D FirstGlance]. <br>
<table><tr><td colspan='2'>[[4m6d]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4M6D FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4m4o|4m4o]]</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.68&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LYZ, lyz1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 CHICK])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4m6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m6d OCA], [https://pdbe.org/4m6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4m6d RCSB], [https://www.ebi.ac.uk/pdbsum/4m6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4m6d ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4m6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m6d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4m6d RCSB], [http://www.ebi.ac.uk/pdbsum/4m6d PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>


==See Also==
==See Also==
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Chick]]
[[Category: Gallus gallus]]
[[Category: Lysozyme]]
[[Category: Large Structures]]
[[Category: Almo, S C]]
[[Category: Almo SC]]
[[Category: Girvin, M]]
[[Category: Girvin M]]
[[Category: Malashkevich, V N]]
[[Category: Malashkevich VN]]
[[Category: Structural genomic]]
[[Category: Padlan FC]]
[[Category: Padlan, F C]]
[[Category: Toro R]]
[[Category: Toro, R]]
[[Category: Hydrolase-rna complex]]
[[Category: Nysgrc]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi-biology]]

Latest revision as of 19:32, 20 September 2023

Crystal structure of the aptamer minF-lysozyme complex.Crystal structure of the aptamer minF-lysozyme complex.

Structural highlights

4m6d is a 12 chain structure with sequence from Gallus gallus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.68Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

LYSC_CHICK Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.[1]

See Also

References

  1. ↑ Maehashi K, Matano M, Irisawa T, Uchino M, Kashiwagi Y, Watanabe T. Molecular characterization of goose- and chicken-type lysozymes in emu (Dromaius novaehollandiae): evidence for extremely low lysozyme levels in emu egg white. Gene. 2012 Jan 15;492(1):244-9. doi: 10.1016/j.gene.2011.10.021. Epub 2011 Oct, 25. PMID:22044478 doi:10.1016/j.gene.2011.10.021

4m6d, resolution 2.68Å

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