4j5k: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Crystal structure analysis of Streptomyces aureofaciens ribonuclease Sa Y51F mutant==
-<StructureSection load='4j5k' size='340' side='right' caption='[[4j5k]], [[Resolution|resolution]] 1.23&Aring;' scene=''>
+<StructureSection load='4j5k' size='340' side='right'caption='[[4j5k]], [[Resolution|resolution]] 1.23&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4j5k]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J5K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4J5K FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4j5k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Kitasatospora_aureofaciens Kitasatospora aureofaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J5K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J5K FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.23&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1sar|1sar]], [[1lni|1lni]], [[1gmp|1gmp]], [[1axy|1axy]], [[1t2i|1t2i]], [[1rge|1rge]], [[1rgf|1rgf]], [[1rgg|1rgg]], [[1rgh|1rgh]], [[1rsn|1rsn]], [[2sar|2sar]], [[4j5g|4j5g]], [[4gho|4gho]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonuclease_T(1) Ribonuclease T(1)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.3 3.1.27.3] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j5k OCA], [https://pdbe.org/4j5k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j5k RCSB], [https://www.ebi.ac.uk/pdbsum/4j5k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j5k ProSAT]</span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4j5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j5k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4j5k RCSB], [http://www.ebi.ac.uk/pdbsum/4j5k PDBsum]</span></td></tr>
+</table>
-<table>
+== Function ==
+[https://www.uniprot.org/uniprot/RNSA_KITAU RNSA_KITAU]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 14: / Line 16: @@
 Contribution of hydrogen bonds to protein stability.,Pace CN, Fu H, Lee Fryar K, Landua J, Trevino SR, Schell D, Thurlkill RL, Imura S, Scholtz JM, Gajiwala K, Sevcik J, Urbanikova L, Myers JK, Takano K, Hebert EJ, Shirley BA, Grimsley GR Protein Sci. 2014 May;23(5):652-61. doi: 10.1002/pro.2449. Epub 2014 Mar 25. PMID:24591301<ref>PMID:24591301</ref>
-From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 4j5k" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Sevcik, J.]]
+[[Category: Kitasatospora aureofaciens]]
-[[Category: Urbanikova, L.]]
+[[Category: Large Structures]]
-[[Category: Endoribonuclease]]
+[[Category: Sevcik J]]
-[[Category: Hydrolase]]
+[[Category: Urbanikova L]]
-[[Category: Mutant]]