4itv: Difference between revisions

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 ==Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains, triple mutant, P212121 form==
-<StructureSection load='4itv' size='340' side='right' caption='[[4itv]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
+<StructureSection load='4itv' size='340' side='right'caption='[[4itv]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4itv]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_10762 Atcc 10762]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ITV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ITV FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4itv]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus_(A/Puerto_Rico/8/1934(H1N1)) Influenza A virus (A/Puerto Rico/8/1934(H1N1))] and [https://en.wikipedia.org/wiki/Kitasatospora_aureofaciens Kitasatospora aureofaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ITV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ITV FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4iq4|4iq4]], [[3vdx|3vdx]], [[4d9j|4d9j]], [[4ivj|4ivj]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.598&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bpoA2, BROMOPEROXIDASE A2 and M1 Matrix, M ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1894 ATCC 10762])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4itv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4itv OCA], [https://pdbe.org/4itv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4itv RCSB], [https://www.ebi.ac.uk/pdbsum/4itv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4itv ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4itv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4itv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4itv RCSB], [http://www.ebi.ac.uk/pdbsum/4itv PDBsum]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/BPOA2_STRAU BPOA2_STRAU]] May be a chlorinating enzyme involved in 7-chlorotetracycline biosynthesis.
+[https://www.uniprot.org/uniprot/BPOA2_KITAU BPOA2_KITAU] May be a chlorinating enzyme involved in 7-chlorotetracycline biosynthesis.[https://www.uniprot.org/uniprot/M1_I34A1 M1_I34A1] Plays critical roles in virus replication, from virus entry and uncoating to assembly and budding of the virus particle. M1 binding to ribonucleocapsids (RNPs) in nucleus seems to inhibit viral transcription. Interaction of viral NEP with M1-RNP is thought to promote nuclear export of the complex, which is targeted to the virion assembly site at the apical plasma membrane in polarized epithelial cells. Interactions with NA and HA may bring M1, a non-raft-associated protein, into lipid rafts. Forms a continuous shell on the inner side of the lipid bilayer in virion, where it binds the RNP. During virus entry into cell, the M2 ion channel acidifies the internal virion core, inducing M1 dissociation from the RNP. M1-free RNPs are transported to the nucleus, where viral transcription and replication can take place.<ref>PMID:11531417</ref>   Determines the virion's shape: spherical or filamentous. Clinical isolates of influenza are characterized by the presence of significant proportion of filamentous virions, whereas after multiple passage on eggs or cell culture, virions have only spherical morphology. Filamentous virions are thought to be important to infect neighboring cells, and spherical virions more suited to spread through aerosol between hosts organisms.<ref>PMID:11531417</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 17: / Line 17: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 4itv" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Haloperoxidase|Haloperoxidase]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Atcc 10762]]
+[[Category: Kitasatospora aureofaciens]]
-[[Category: Lai, Y T]]
+[[Category: Large Structures]]
-[[Category: Sawaya, M R]]
+[[Category: Lai Y-T]]
-[[Category: Yeates, T O]]
+[[Category: Sawaya MR]]
-[[Category: Biomaterial]]
+[[Category: Yeates TO]]
-[[Category: Bionanotechnology]]
-[[Category: Oxidoreductase]]
-[[Category: Protein assembly]]
-[[Category: Protein design]]
-[[Category: Symmetric oligomeric domain]]