1vph: Difference between revisions

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-{{Seed}}
-[[Image:1vph.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF a YbjQ-like protein of unknown function (SSO2532) FROM SULFOLOBUS SOLFATARICUS P2 AT 1.76 A RESOLUTION==
-The line below this paragraph, containing "STRUCTURE_1vph", creates the "Structure Box" on the page.
+<StructureSection load='1vph' size='340' side='right'caption='[[1vph]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1vph]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VPH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VPH FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.764&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-{{STRUCTURE_1vph|  PDB=1vph  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vph FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vph OCA], [https://pdbe.org/1vph PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vph RCSB], [https://www.ebi.ac.uk/pdbsum/1vph PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vph ProSAT], [https://www.topsan.org/Proteins/JCSG/1vph TOPSAN]</span></td></tr>
+</table>
-===Crystal structure of a proteins that adopts a YbjQ-like fold with unknown function (13815834) from Sulfolobus solfataricus at 1.76 A resolution===
+== Function ==
+[https://www.uniprot.org/uniprot/Q97VS8_SACS2 Q97VS8_SACS2]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-VPH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus_p2 Sulfolobus solfataricus p2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VPH OCA].
+Check<jmol>
-[[Category: Single protein]]
+  <jmolCheckbox>
-[[Category: Sulfolobus solfataricus p2]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vp/1vph_consurf.spt"</scriptWhenChecked>
-[[Category: JCSG, Joint Center for Structural Genomics.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: 13815834]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Hypothetical protein]]
+  </jmolCheckbox>
-[[Category: Jcsg]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vph ConSurf].
-[[Category: Joint center for structural genomic]]
+<div style="clear:both"></div>
-[[Category: Protein structure initiative]]
+__TOC__
-[[Category: Psi]]
+</StructureSection>
-[[Category: Structural genomic]]
+[[Category: Large Structures]]
+[[Category: Saccharolobus solfataricus P2]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 04:58:52 2008''