1vph: Difference between revisions

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[[Image:1vph.gif|left|200px]]<br /><applet load="1vph" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1vph, resolution 1.764&Aring;" />
'''Crystal structure of a proteins that adopts a YbjQ-like fold with unknown function (13815834) from Sulfolobus solfataricus at 1.76 A resolution'''<br />


==About this Structure==
==CRYSTAL STRUCTURE OF a YbjQ-like protein of unknown function (SSO2532) FROM SULFOLOBUS SOLFATARICUS P2 AT 1.76 A RESOLUTION==
1VPH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus_p2 Sulfolobus solfataricus p2] with <scene name='pdbligand=K:'>K</scene>, <scene name='pdbligand=PO4:'>PO4</scene>, <scene name='pdbligand=CL:'>CL</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VPH OCA].
<StructureSection load='1vph' size='340' side='right'caption='[[1vph]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Sulfolobus solfataricus p2]]
<table><tr><td colspan='2'>[[1vph]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VPH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VPH FirstGlance]. <br>
[[Category: JCSG, Joint Center for Structural Genomics.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.764&#8491;</td></tr>
[[Category: CL]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[Category: EDO]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vph FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vph OCA], [https://pdbe.org/1vph PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vph RCSB], [https://www.ebi.ac.uk/pdbsum/1vph PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vph ProSAT], [https://www.topsan.org/Proteins/JCSG/1vph TOPSAN]</span></td></tr>
[[Category: K]]
</table>
[[Category: PO4]]
== Function ==
[[Category: 13815834]]
[https://www.uniprot.org/uniprot/Q97VS8_SACS2 Q97VS8_SACS2]  
[[Category: hypothetical protein]]
== Evolutionary Conservation ==
[[Category: jcsg]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: joint center for structural genomics]]
Check<jmol>
[[Category: protein structure initiative]]
  <jmolCheckbox>
[[Category: psi]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vp/1vph_consurf.spt"</scriptWhenChecked>
[[Category: structural genomics]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:37:14 2008''
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vph ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharolobus solfataricus P2]]

Latest revision as of 17:53, 20 September 2023

CRYSTAL STRUCTURE OF a YbjQ-like protein of unknown function (SSO2532) FROM SULFOLOBUS SOLFATARICUS P2 AT 1.76 A RESOLUTIONCRYSTAL STRUCTURE OF a YbjQ-like protein of unknown function (SSO2532) FROM SULFOLOBUS SOLFATARICUS P2 AT 1.76 A RESOLUTION

Structural highlights

1vph is a 6 chain structure with sequence from Saccharolobus solfataricus P2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.764Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q97VS8_SACS2

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vph, resolution 1.76Å

Drag the structure with the mouse to rotate

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OCA
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