1o5u: Difference between revisions

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New page: left|200px<br /><applet load="1o5u" size="450" color="white" frame="true" align="right" spinBox="true" caption="1o5u, resolution 1.83Å" /> '''Crystal structure of...
 
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[[Image:1o5u.gif|left|200px]]<br /><applet load="1o5u" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1o5u, resolution 1.83&Aring;" />
'''Crystal structure of a novel Thermotoga maritima enzyme (TM1112) from Thermotoga maritima at 1.83 A resolution'''<br />


==About this Structure==
==Crystal structure of a duf861 family protein (tm1112) from thermotoga maritima at 1.83 A resolution==
1O5U is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with UNL as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1O5U OCA].  
<StructureSection load='1o5u' size='340' side='right'caption='[[1o5u]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[1o5u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1O5U FirstGlance]. <br>
Crystal structure of a novel Thermotoga maritima enzyme (TM1112) from the cupin family at 1.83 A resolution., McMullan D, Schwarzenbacher R, Jaroszewski L, von Delft F, Klock HE, Vincent J, Quijano K, Abdubek P, Ambing E, Biorac T, Brinen LS, Canaves JM, Dai X, Deacon AM, DiDonato M, Elsliger MA, Eshaghi S, Floyd R, Godzik A, Grittini C, Grzechnik SK, Hampton E, Karlak C, Koesema E, Kreusch A, Kuhn P, Levin I, McPhillips TM, Miller MD, Morse A, Moy K, Ouyang J, Page R, Reyes R, Rezezadeh F, Robb A, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Wang X, West B, Wolf G, Xu Q, Hodgson KO, Wooley J, Lesley SA, Wilson IA, Proteins. 2004 Aug 15;56(3):615-8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15229894 15229894]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
[[Category: Single protein]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1o5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o5u OCA], [https://pdbe.org/1o5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1o5u RCSB], [https://www.ebi.ac.uk/pdbsum/1o5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1o5u ProSAT], [https://www.topsan.org/Proteins/JCSG/1o5u TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9X0J6_THEMA Q9X0J6_THEMA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o5/1o5u_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1o5u ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
[[Category: UNL]]
[[Category: jcsg]]
[[Category: joint center for structural genomics]]
[[Category: novel thermotoga maritima enzyme]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]
[[Category: tm1112]]
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 00:25:11 2007''

Latest revision as of 17:52, 20 September 2023

Crystal structure of a duf861 family protein (tm1112) from thermotoga maritima at 1.83 A resolutionCrystal structure of a duf861 family protein (tm1112) from thermotoga maritima at 1.83 A resolution

Structural highlights

1o5u is a 2 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.83Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9X0J6_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1o5u, resolution 1.83Å

Drag the structure with the mouse to rotate

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OCA
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