5j0d: Difference between revisions
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==Crystal structure of the bromodomain of human CREBBP in complex with a benzoxazepine compound== | ==Crystal structure of the bromodomain of human CREBBP in complex with a benzoxazepine compound== | ||
<StructureSection load='5j0d' size='340' side='right' caption='[[5j0d]], [[Resolution|resolution]] 1.05Å' scene=''> | <StructureSection load='5j0d' size='340' side='right'caption='[[5j0d]], [[Resolution|resolution]] 1.05Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5j0d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J0D OCA]. For a <b>guided tour on the structure components</b> use [ | <table><tr><td colspan='2'>[[5j0d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5J0D FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6F9:7-(3,5-DIMETHOXYPHENYL)-N-[(3S)-1-METHYLPIPERIDIN-3-YL]-4-PROPANOYL-2,3,4,5-TETRAHYDRO-1,4-BENZOXAZEPINE-9-CARBOXAMIDE'>6F9</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.05Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6F9:7-(3,5-DIMETHOXYPHENYL)-N-[(3S)-1-METHYLPIPERIDIN-3-YL]-4-PROPANOYL-2,3,4,5-TETRAHYDRO-1,4-BENZOXAZEPINE-9-CARBOXAMIDE'>6F9</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5j0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j0d OCA], [https://pdbe.org/5j0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5j0d RCSB], [https://www.ebi.ac.uk/pdbsum/5j0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5j0d ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Disease == | == Disease == | ||
[ | [https://www.uniprot.org/uniprot/CBP_HUMAN CBP_HUMAN] Note=Chromosomal aberrations involving CREBBP may be a cause of acute myeloid leukemias. Translocation t(8;16)(p11;p13) with KAT6A; translocation t(11;16)(q23;p13.3) with MLL/HRX; translocation t(10;16)(q22;p13) with KAT6B. KAT6A-CREBBP may induce leukemia by inhibiting RUNX1-mediated transcription. Defects in CREBBP are a cause of Rubinstein-Taybi syndrome type 1 (RSTS1) [MIM:[https://omim.org/entry/180849 180849]. RSTS1 is an autosomal dominant disorder characterized by craniofacial abnormalities, broad thumbs, broad big toes, mental retardation and a propensity for development of malignancies.<ref>PMID:11331617</ref> <ref>PMID:12114483</ref> <ref>PMID:12566391</ref> <ref>PMID:15706485</ref> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/CBP_HUMAN CBP_HUMAN] Acetylates histones, giving a specific tag for transcriptional activation. Also acetylates non-histone proteins, like NCOA3 and FOXO1. Binds specifically to phosphorylated CREB and enhances its transcriptional activity toward cAMP-responsive genes. Acts as a coactivator of ALX1 in the presence of EP300.<ref>PMID:9707565</ref> <ref>PMID:11154691</ref> <ref>PMID:12738767</ref> <ref>PMID:12929931</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 5j0d" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5j0d" style="background-color:#fffaf0;"></div> | ||
==See Also== | |||
*[[CREB-binding protein 3D structures|CREB-binding protein 3D structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: Arrowsmith | [[Category: Large Structures]] | ||
[[Category: Bountra | [[Category: Arrowsmith CH]] | ||
[[Category: | [[Category: Bountra C]] | ||
[[Category: Edwards | [[Category: Bracher F]] | ||
[[Category: Fedorov | [[Category: Edwards AM]] | ||
[[Category: Knapp | [[Category: Fedorov O]] | ||
[[Category: Picaud | [[Category: Knapp S]] | ||
[[Category: Popp | [[Category: Picaud S]] | ||
[[Category: Popp TA]] | |||
[[Category: Siejka | [[Category: Siejka P]] | ||
[[Category: Tallant | [[Category: Tallant C]] | ||
[[Category: | [[Category: Von Delft F]] | ||