3pha: Difference between revisions

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 ==The crystal structure of the W169Y mutant of alpha-glucosidase (gh31 family) from Ruminococcus obeum atcc 29174 in complex with acarbose==
-<StructureSection load='3pha' size='340' side='right' caption='[[3pha]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
+<StructureSection load='3pha' size='340' side='right'caption='[[3pha]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3pha]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruminococcus_obeum_atcc_29174 Ruminococcus obeum atcc 29174]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3nxm 3nxm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PHA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PHA FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3pha]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Blautia_obeum_ATCC_29174 Blautia obeum ATCC 29174]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3nxm 3nxm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PHA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PHA FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACR:ALPHA-ACARBOSE'>ACR</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.173&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3nxm|3nxm]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AC1:6-METHYL-5-(4,5,6-TRIHYDROXY-3-HYDROXYMETHYL-CYCLOHEX-2-ENYLAMINO)-TETRAHYDRO-PYRAN-2,3,4-TRIOL'>AC1</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900007:alpha-acarbose'>PRD_900007</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RUMOBE_03919 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411459 Ruminococcus obeum ATCC 29174])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pha FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pha OCA], [https://pdbe.org/3pha PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pha RCSB], [https://www.ebi.ac.uk/pdbsum/3pha PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pha ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pha FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pha OCA], [http://pdbe.org/3pha PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3pha RCSB], [http://www.ebi.ac.uk/pdbsum/3pha PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3pha ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A5ZY13_9FIRM A5ZY13_9FIRM]
 ==See Also==
-*[[Alpha-glucosidase|Alpha-glucosidase]]
+*[[Alpha-glucosidase 3D structures|Alpha-glucosidase 3D structures]]
 __TOC__
 </StructureSection>
-[[Category: Ruminococcus obeum atcc 29174]]
+[[Category: Blautia obeum ATCC 29174]]
-[[Category: Babnigg, G]]
+[[Category: Large Structures]]
-[[Category: Joachimiak, A]]
+[[Category: Babnigg G]]
-[[Category: Keigher, L]]
+[[Category: Joachimiak A]]
-[[Category: Structural genomic]]
+[[Category: Keigher L]]
-[[Category: Tan, K]]
+[[Category: Tan K]]
-[[Category: Tesar, C]]
+[[Category: Tesar C]]
-[[Category: Hydrolase]]
-[[Category: Hydrolase-hydrolase inhibitor complex]]
-[[Category: Mcsg]]
-[[Category: PSI, Protein structure initiative]]
-[[Category: Structuralcomplex]]